SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene12130

Length: 776 nt

Origin of reads: Biogeco2 v2 Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene12130

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DNA repair and recombination protein radB, putative n=1 Tax=Ricinus communis RepID=B9SYN5_RICCO	-	-	5.0e-29	52%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	92%
Blast2go	dna repair protein rad51-like 4	-	-	0.0	72%

Source	GOs	Term	Type	Identity
Blast2go	somatic cell DNA recombination	GO:0016444	Biological Process	72%
Blast2go	regulation of response to biotic stimulus	GO:0002831	Biological Process	72%
Blast2go	DNA repair	GO:0006281	Biological Process	72%
Blast2go	DNA-dependent ATPase activity	GO:0008094	Molecular Function	72%
Blast2go	DNA binding	GO:0003677	Molecular Function	72%
Blast2go	ATP binding	GO:0005524	Molecular Function	72%

Source	InterPros	Term	Type	Identity
Sma3		IPR001553	-	-
Sma3	Pentatricopeptide repeat	IPR002885	-	-
Sma3	AAA+ ATPase domain	IPR003593	-	-
Sma3	Plant disease resistance response protein	IPR004265	-	-
Sma3	Tetratricopeptide-like helical	IPR011990	-	-

Full-Lengther Next Prediction

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain