SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene11371

Length: 645 nt

Origin of reads: Biogeco1 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene11371

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	APETALA2-like protein 2 n=1 Tax=Pinus thunbergii RepID=Q76H94_PINTH	-	-	76%
FL-Next	tr=APETALA2-like protein 2; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana).	-	-	94%
Blast2go	apetala2-like protein 2	-	-	90%

Source	GOs	Term	Type	Identity
Blast2go	regulation of transcription, DNA-dependent	GO:0006355	Biological Process	90%
Blast2go	sequence-specific DNA binding transcription factor activity	GO:0003700	Molecular Function	90%
Blast2go	DNA binding	GO:0003677	Molecular Function	90%
Blast2go	nucleus	GO:0005634	Cellular Component	90%

Source	InterPros	Term	Type	e value	Identity
Sma3	AP2/ERF domain	IPR001471	-	0.0	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
71		75		25	0.996473
85		25		75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain