SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene10543

Length: 875 nt

Origin of reads: Biogeco1 v2 Uagpf v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene10543 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice).	-	-	0.0	51%
Blast2go	uncharacterized protein loc100277317	-	-	9.62729e-17	67%

Full-Lengther Next Prediction

SNPs (tot: 39)

Position	A %	C %	G %	T %	Probability
601	20	80			0.995493
602		80	20		0.995493
604	20	80			0.995493
605	20			80	0.995493
606	20		80		0.995493
702		11		88	0.923564
703		11		88	0.923564
704	11			88	0.923564
786	83			16	0.994512
787		20	20	60	0.99255
788	20			80	0.995493
789			20	80	0.995493
792	20	80			0.995493
794	20	80			0.995493
797		20	80		0.995493
800			20	80	0.995493
801			20	80	0.995493
804	40			60	1.0
806			20	80	0.995493
808		20	80		0.995493
811	25	75			0.996473
827	25		75		0.996473
834		25	75		0.996473
836		25	75		0.996473
837	75	25			0.996473
838	25		75		0.996473
840	75			25	0.996473
850		66		33	0.997452
851		33		33	0.997753
854	66			33	0.997452
855			66	33	0.997452
857		33	66		0.997452
858	66	33			0.997452
860	66			33	0.997452
861		33	66		0.997452
862	33	66			0.997452
865	66			33	0.997452
869	33	66			0.997452
876			66	33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain