SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene9960

Length: 1007 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene9960

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Nucleotid_trans domain containing protein	-	-	2.0e-05	51%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	47%
Blast2go	uncharacterized protein at4g15970-like	-	-	1.24167e-27	71%

Source	GOs	Term	Type	e value	Identity
Blast2go	mitochondrion	GO:0005739	Cellular Component	1.24167e-27	71%

Source	InterPros	Term	Type	e value	Identity
Sma3	DNA-directed DNA polymerase, family B, conserved site	IPR017964	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
626		66		33	0.997452
627	66		33		0.997452
629		33		66	0.997452
630		33	66		0.997452
634	66		33		0.997452
636	66			33	0.997452
638	66			33	0.997452
639	66	33			0.997452
641		33		66	0.997452
642	66			33	0.997452
643		33		66	0.997452
644	33		66		0.997452
848		60	40		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain