SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene9182

Length: 781 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene9182

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	microtubule bundling polypeptide TMBP200 [Nicotiana tabacum]	-	-	79%
FL-Next	sp=Protein MOR1; Arabidopsis thaliana (Mouse-ear cress).	-	-	77%
Blast2go	microtubule organization protein	-	-	88%

Source	GOs	Term	Type	Identity
Blast2go	microtubule cytoskeleton organization	GO:0000226	Biological Process	88%
Blast2go	intracellular protein transport	GO:0006886	Biological Process	88%
Blast2go	cell plate formation involved in plant-type cell wall biogenesis	GO:0009920	Biological Process	88%
Blast2go	microtubule binding	GO:0008017	Molecular Function	88%
Blast2go	microtubule	GO:0005874	Cellular Component	88%
Blast2go	preprophase band	GO:0009574	Cellular Component	88%
Blast2go	spindle	GO:0005819	Cellular Component	88%
Blast2go	cortical microtubule cytoskeleton	GO:0030981	Cellular Component	88%
Blast2go	phragmoplast	GO:0009524	Cellular Component	88%

Source	InterPros	Term	Type	Identity
Sma3	HEAT	IPR000357	-	-
Sma3	VHS	IPR002014	-	-
Sma3	Armadillo-like helical	IPR011989	-	-

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
733	25			75	0.996473
755	66		33		0.997452

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain