SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene9041

Length: 1165 nt

Origin of reads: Inia v1 Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene9041

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Ras-related protein Rab7 n=11 Tax=core eudicotyledons RepID=RAB7_SOYBN	-	-	83%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	81%
Blast2go	ras-related protein rab7	-	-	92%

Source	GOs	Term	Type	Identity
Blast2go	small GTPase mediated signal transduction	GO:0007264	Biological Process	92%
Blast2go	protein transport	GO:0015031	Biological Process	92%
Blast2go	GTP binding	GO:0005525	Molecular Function	92%
Blast2go	hydrolase activity	GO:0016787	Molecular Function	92%
Blast2go	plasma membrane	GO:0005886	Cellular Component	92%

Source	InterPros	Term	Type	Identity
Sma3	Cullin, N-terminal	IPR001373	-	-
Sma3	Small GTPase superfamily	IPR001806	-	-
Sma3	Zinc finger, CCHC-type	IPR001878	-	-
Sma3	RNA polymerase sigma factor 54, interaction	IPR002078	-	-
Sma3	Small GTPase superfamily, Rab type	IPR003579	-	-
Sma3	Small GTP-binding protein domain	IPR005225	-	-
Sma3		IPR013753	-	-

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
567	66		33		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain