SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene7971

Length: 721 nt

Origin of reads: Biogeco3 v1 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene7971

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	WS02784.CR_D18 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02784_D18 3', mRNA sequence.	-	-	81%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	83%
Blast2go	protein	-	-	61%

Source	GOs	Term	Type	Identity
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	61%
Blast2go	oxidoreductase activity	GO:0016491	Molecular Function	61%
Blast2go	nucleus	GO:0005634	Cellular Component	61%

Source	InterPros	Term	Type	e value	Identity
Sma3	Taurine catabolism dioxygenase TauD/TfdA	IPR003819	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
434		75		25	0.996473
509		60		40	1.0
549		75	25		0.996473
579	50		50		1.0
596			50	50	1.0
614			75	25	0.996473
635	66			33	0.997452
637	66	33			0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain