SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene7957

Length: 2101 nt

Origin of reads: Biogeco3 v1 Uagpf v2

UniGene Fasta

>sp_v2.0_unigene7957
CACGAGAGCCACCATTCGTATTTACAGGCGGCTAGCGTATTGTAAAGGTCATCAGATTTGGGTTTTGAATTATGGTGCTTTCTCTCCCCACTTCAATTTGTGGTCACCTACTGCAGGCTGCTGGCCGTAATCTTGAATGTTGTTGGGTTGTAAAGCAAACTTCCGTTTTTCCTTTAATGGAAACTCGAAAAACTCGTGGATTTATCAGCTGAAAAATATCCCCATTCTTGGCAAGCCATGTGAAGTTTGAGCATCTCTTCTCCCACATAATTGTTACGCAACATATTTTTCATATCAATAATCGGAATACTACTGTCAGGAGTTGGGCTTTTCACAGTAGGTCTGTCTCCCTCTGATTTAACGTATTCCTTAGGTTGGTCGGGCTTCTTACAGATTGAGATACAGCGACAAAAATGCCTGACCTACAGGCGGCAGTTAATGATTTTGTTGTCAAGCTCAAGCGACGGCAGGTTGAGGGTTCACAGGCCACTGCTAGAGAAACTGCAGTTCTTCTACGGTCTGTTATCTCTCAACAAAGAGTACCACACTCAAATCAGGCAGCTTCACTTATTGAAGCTGTGAAGTCAGTGGGCGTGCAACTTATAGCTGCCAATCCAGTTGAGCTATCTGTTGGGAACATTGTGAGACATATATTACATATAATTCGCGAGGAGGATGTGTCTTTGGCAACAACGGGTGTTGGAGGTTTAAGTGTCTCTGCTGGCAGTGATGATGAGGATGATACCCAGCATGATAACTCTTCGGCATTATCTGCAGCTGCTCTTGCTGCTGCATCTAGAAGTGCTTTGCGAGCTCCCTCATTACATAATCTTTTAGAATCTATACCTAGCCCAGCAGCTGCTCCTCTCACTGGTTCTTCAGGAGGCGAGTCTGAAGGAAAAAGCAAATCTGCTGACAAAAACTCAAGGAGCTGGAAATTGAAGCATGGAGTAATTGAGGCTATTAATGAACTGATTGAAGATATTGATAACAGTCACTCTCAGATTGCAGAGCAAGCATTGGAACATATTCATCAGAACGAGGTGATATTAACTTTAGGACACTCAAGGACAGTGATGCAATTTCTCTGCGAGGCCAAGAAAAAGAGATCTTTTCAAGTTTTCATTGCAGAGGGTGCTCCTAGATATCAAGGACATGCCCTTGCTAAAGAGCTCGTTGCAAAAGATTTGCAAACAACAGTGATTACTGATTCAGCTGTCTTTGCTATGATATCACGTGTGAACATGGTCATGGTAGGTGCTCATGCTGTCATGGCCAATGGTGGAGTCATAGCACCAGTAGGACATCATATGGTTGCACTTGCAGCTCATCGACATGCAGTTCCATTTGTTGTACTGGCTGCCTCGCACAAGCTCTGCCCTTTGTATCCACACAACCCCGAAGTTTTGTTGAATGATCTTAAATCACCATCAGAGTTGTTGGATCTTGGAGACTTCTCTGATTGTATCGATGGTGTAACTGGAGGTACAAGACTGCGTGTTGTCAATCCAGCATTTGACTATGTTCCTCCACAACTCGTGAGCCTTTTCGTTACTGATACTGGAGGACACAACCCTTCATACATGTACCGATTAATAGCGGAATATTACACTCCTGATGACTATGTGCTCCAGCAACATGTAGAACCTGGGATCTAAGATAGCCCATGTATCTTATACAGCTTGTTAACAGTTTTATTTCTTGAAATTCTCTGCAAGTCTTCCTTTGTACGTACCTAGTGATTCTTGATTGAATCTTTTCTTCTCGAGTTTGCTGAAATTGCCAGAAGTTGCGCATACATAATGAGACAATGATTGATTTTGCAAATATCATTTGTTCCTGGTAACCTCATGCCAGAATGATTCTACGTAGAATAGCTTTGTCCTTCCAAGTGATGAAAATAAAATGAGAAATCTCTCTCTCTAGAAATATGAAGAAATTTAAGGGCAGAAAGATGAAAAAATGCCTCTTGCTTGCACATGCACAGAGATGTCCTTTCTGGCAAATAATGCCTTCCAATGCCAAATTTATTGTTTACATTGAACTTGAATTTTCAAGGCTACTATTTTATCATATATCAGGACACCTATTTTTAGTAAAC

Ace file of the UniGene sp_v2.0_unigene7957

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Putative translation initiation factor 2B beta subunit n=1 Tax=Nicotiana tabacum RepID=Q9SPU4_TOBAC	-	-	68%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	85%
Blast2go	translation initiation factor eif-2b beta subunit	-	-	83%

Source	GOs	Term	Type	Identity
Blast2go	translational initiation	GO:0006413	Biological Process	83%
Blast2go	GTP binding	GO:0005525	Molecular Function	83%
Blast2go	translation initiation factor activity	GO:0003743	Molecular Function	83%
Blast2go	eukaryotic translation initiation factor 2B complex	GO:0005851	Cellular Component	83%

Source	InterPros	Term	Type	e value	Identity
Sma3	Initiation factor 2B-related	IPR000649	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: D5ADE2

Fln msg: your sequence is longer than subject: 415 - 371

Fln protein: MPDLQAAVNDFVVKLKRRQVEGSQATARETAVLLRSVISQQRVPHSNQAASLIEAVKSVGVQLIAANPVELSVGNIVRHILHIIREEDVSLATTGVGGLSVSAGSDDEDDTQHDNSSALSAAALAAASRSALRAPSLHNLLESIPSPAAAPLTGSSGGESEGKSKSADKNSRSWKLKHGVIEAINELIEDIDNSHSQIAEQALEHIHQNEVILTLGHSRTVMQFLCEAKKKRSFQVFIAEGAPRYQGHALAKELVAKDLQTTVITDSAVFAMISRVNMVMVGAHAVMANGGVIAPVGHHMVALAAHRHAVPFVVLAASHKLCPLYPHNPEVLLNDLKSPSELLDLGDFSDCIDGVTGGTRLRVVNPAFDYVPPQLVSLFVTDTGGHNPSYMYRLIAEYYTPDDYVLQQHVEPGI*

Protein Length: 416

Fln nts: CACGAGAGCCACCATTCGTATTTACAGGCGGCTAGCGTATTGTAAAGGTCATCAGATTTGGGTTTTGAATTATGGTGCTTTCTCTCCCCACTTCAATTTGTGGTCACCTACTGCAGGCTGCTGGCCGTAATCTTGAATGTTGTTGGGTTGTAAAGCAAACTTCCGTTTTTCCTTTAATGGAAACTCGAAAAACTCGTGGATTTATCAGCTGAAAAATATCCCCATTCTTGGCAAGCCATGTGAAGTTTGAGCATCTCTTCTCCCACATAATTGTTACGCAACATATTTTTCATATCAATAATCGGAATACTACTGTCAGGAGTTGGGCTTTTCACAGTAGGTCTGTCTCCCTCTGATTTAACGTATTCCTTAGGTTGGTCGGGCTTCTTACAGATTGAGATACAGCGACAAAA_-_ATGCCTGACCTACAGGCGGCAGTTAATGATTTTGTTGTCAAGCTCAAGCGACGGCAGGTTGAGGGTTCACAGGCCACTGCTAGAGAAACTGCAGTTCTTCTACGGTCTGTTATCTCTCAACAAAGAGTACCACACTCAAATCAGGCAGCTTCACTTATTGAAGCTGTGAAGTCAGTGGGCGTGCAACTTATAGCTGCCAATCCAGTTGAGCTATCTGTTGGGAACATTGTGAGACATATATTACATATAATTCGCGAGGAGGATGTGTCTTTGGCAACAACGGGTGTTGGAGGTTTAAGTGTCTCTGCTGGCAGTGATGATGAGGATGATACCCAGCATGATAACTCTTCGGCATTATCTGCAGCTGCTCTTGCTGCTGCATCTAGAAGTGCTTTGCGAGCTCCCTCATTACATAATCTTTTAGAATCTATACCTAGCCCAGCAGCTGCTCCTCTCACTGGTTCTTCAGGAGGCGAGTCTGAAGGAAAAAGCAAATCTGCTGACAAAAACTCAAGGAGCTGGAAATTGAAGCATGGAGTAATTGAGGCTATTAATGAACTGATTGAAGATATTGATAACAGTCACTCTCAGATTGCAGAGCAAGCATTGGAACATATTCATCAGAACGAGGTGATATTAACTTTAGGACACTCAAGGACAGTGATGCAATTTCTCTGCGAGGCCAAGAAAAAGAGATCTTTTCAAGTTTTCATTGCAGAGGGTGCTCCTAGATATCAAGGACATGCCCTTGCTAAAGAGCTCGTTGCAAAAGATTTGCAAACAACAGTGATTACTGATTCAGCTGTCTTTGCTATGATATCACGTGTGAACATGGTCATGGTAGGTGCTCATGCTGTCATGGCCAATGGTGGAGTCATAGCACCAGTAGGACATCATATGGTTGCACTTGCAGCTCATCGACATGCAGTTCCATTTGTTGTACTGGCTGCCTCGCACAAGCTCTGCCCTTTGTATCCACACAACCCCGAAGTTTTGTTGAATGATCTTAAATCACCATCAGAGTTGTTGGATCTTGGAGACTTCTCTGATTGTATCGATGGTGTAACTGGAGGTACAAGACTGCGTGTTGTCAATCCAGCATTTGACTATGTTCCTCCACAACTCGTGAGCCTTTTCGTTACTGATACTGGAGGACACAACCCTTCATACATGTACCGATTAATAGCGGAATATTACACTCCTGATGACTATGTGCTCCAGCAACATGTAGAACCTGGGATCTAA___GATAGCCCATGTATCTTATACAGCTTGTTAACAGTTTTATTTCTTGAAATTCTCTGCAAGTCTTCCTTTGTACGTACCTAGTGATTCTTGATTGAATCTTTTCTTCTCGAGTTTGCTGAAATTGCCAGAAGTTGCGCATACATAATGAGACAATGATTGATTTTGCAAATATCATTTGTTCCTGGTAACCTCATGCCAGAATGATTCTACGTAGAATAGCTTTGTCCTTCCAAGTGATGAAAATAAAATGAGAAATCTCTCTCTCTAGAAATATGAAGAAATTTAAGGGCAGAAAGATGAAAAAATGCCTCTTGCTTGCACATGCACAGAGATGTCCTTTCTGGCAAATAATGCCTTCCAATGCCAAATTTATTGTTTACATTGAACTTGAATTTTCAAGGCTACTATTTTATCATATATCAGGACACCTATTTTTAGTAAAC

Fln Alignment:

Contig7957___MPDLQAAVNDFVVKLKRRQVEGSQATARETAVLLRSVISQQRVPHSNQAASLIEAVKSVGVQLIAANPVELSVGNIVRHILHIIREEDVSLATTGVGGLSVSAGSDDEDDTQHDNXXXXXXXXXXXXXXXXXXXXXXHNLLESIPSPAAAPLTXXXXXXXXXXXXXADKNSRSWKLKHGVIEAINELIEDIDNSHSQIAEQALEHIHQNEVILTLGHSRTVMQFLCEAKKKRSFQVFIAEGAPRYQGHALAKELVAKDLQTTVITDSAVFAMISRVNMVMVGAHAVMANGGVIAPVGHHMVALAAHRHAVPFVVLAASHKLCPLYPHNPEVLLNDLKSPSELLDLGDFSDCIDGVTGGTRLRVVNPAFDYVPPQLVSLFVTDTGGHNPSYMYRLIAEYYTPDDYVLQQHVEPGI
D5ADE2______________MPDLQAAVNDFVVRLKRRQVEGSQATARETAVLLRSVISQQRVPHSNQAASLIEAVTSVGVQLIAANPVELSVGNIVRHILHIIREEDVSLATTGVGGLSVSVGSDDEDDTQHDNSSALSAAALAAASRSALRAPSLHNLLESIPSPAVAPLAFSLGGESEGKSK-SDKNSRSWQLKHGVIEAINELIEDIDNCHSQIAEQALEHIHQNEVILTLGHSRTVMEFLCEAKKKRSFQVFIAEGAPRYQGHALAKELVAKDLQTTVITDSAVFAMISRVNM------------------------------------------LCPLYPHNPEVLLNDLKSPSELLDFGDFSDCIDGGTGGTRLHVVNPAFDYVPPQLVSLFITDTGGHNPSYMYRLIADYYTPDDYVLQQHVESGI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain