SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene6397

Length: 988 nt

Origin of reads: Biogeco1 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene6397

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	carbon-sulfur lyase [Arabidopsis thaliana] ref\|NP_001154714.1\| carbon-sulfur lyase [Arabidopsis thaliana] emb\|CAC01707.1\| putative protein [Arabidopsis thaliana] dbj\|BAC42734.1\| unknown protein [Arabidopsis thaliana] gb\|AAO63868.1\| unknown protein [Arabid	-	-	4.0e-37	53%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%
Blast2go	carbon-sulfur lyase	-	-	0.0	72%

Source	GOs	Term	Type	e value	Identity
Blast2go	metabolic process	GO:0008152	Biological Process	0.0	72%
Blast2go	carbon-sulfur lyase activity	GO:0016846	Molecular Function	0.0	72%

Source	InterPros	Term	Type	e value	Identity
Sma3	Glutathione-dependent formaldehyde-activating enzyme/centromere protein V	IPR006913	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
642	10		90		0.999898
829	16			83	0.994512
861		20		80	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain