SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene6023

Length: 790 nt

Origin of reads: Uagpf v2 Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene6023 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Benzoate carboxyl methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SYY5_RICCO	-	-	3.00018e-42	56%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	40%
Blast2go	s-adenosyl-l-methionine:salicylic acid carboxyl methyltransferase-like protein	-	-	2.1566e-42	74%

Source	GOs	Term	Type	e value	Identity
Blast2go	polarity specification of adaxial/abaxial axis	GO:0009944	Biological Process	2.1566e-42	74%
Blast2go	auxin homeostasis	GO:0010252	Biological Process	2.1566e-42	74%
Blast2go	identical protein binding	GO:0042802	Molecular Function	2.1566e-42	74%
Blast2go	indole acetic acid carboxyl methyltransferase activity	GO:0051749	Molecular Function	2.1566e-42	74%
Blast2go	S-adenosylmethionine-dependent methyltransferase activity	GO:0008757	Molecular Function	2.1566e-42	74%
Blast2go	magnesium ion binding	GO:0000287	Molecular Function	2.1566e-42	74%

Source	InterPros	Term	Type	e value	Identity
Sma3	SAM dependent carboxyl methyltransferase	IPR005299	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 47)

Position	A %	C %	G %	T %	Probability
192		80		20	0.995493
279	75			25	0.996473
289	80	20			0.995493
297			25	75	0.996473
298	25			75	0.996473
299	75		25		0.996473
300	75			25	0.996473
301	75		25		0.996473
302	25	50		25	1.0
303		25		75	0.996473
304	25			75	0.996473
305			25	75	0.996473
306		25		75	0.996473
308	25			75	0.996473
310			20	80	0.995493
311			20	80	0.995493
313		20		80	0.995493
315		20		80	0.995493
316			20	80	0.995493
317	20			80	0.995493
319			20	80	0.995493
350		75	25		0.996473
352	75			25	0.996473
355		25		75	0.996473
356	25	75			0.996473
357		75	25		0.996473
358		25		75	0.996473
368	25	75			0.996473
487	12			87	0.992554
488	12			87	0.992554
489			12	87	0.992554
490		87	12		0.992554
491		87		12	0.992554
494		12	87		0.992554
495			12	87	0.992554
496	12			87	0.992554
498	87		12		0.992554
626	33		16		1.0
629	66		33		1.0
632	33		66		1.0
633			33	66	1.0
634		33		66	1.0
635		33	66		1.0
644	33	66			1.0
646			33	66	1.0
647	33		66		1.0
649			33	66	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain