SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene4829

Length: 834 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene4829

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	FKBP-type peptidyl-prolyl cis-trans isomerase 3 [Arabidopsis thaliana] sp\|Q9SCY2.2\|FKBP3_ARATH RecName: Full=FKBP-type peptidyl-prolyl cis-trans isomerase 3, chloroplastic; Short=PPIase; AltName: Full=AtFKBP13; AltName: Full=FK506-binding protein 1; AltNa	-	-	2.0e-40	67%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	81%
Blast2go	protein	-	-	0.0	82%

Source	ECs	Term	Type	e value	Identity
Blast2go	Peptidylprolyl isomerase.	EC:5.2.1.8	-	0.0	82%

Source	GOs	Term	Type	Identity
Blast2go	protein folding	GO:0006457	Biological Process	82%
Blast2go	protein peptidyl-prolyl isomerization	GO:0000413	Biological Process	82%
Blast2go	FK506 binding	GO:0005528	Molecular Function	82%
Blast2go	protein binding	GO:0005515	Molecular Function	82%
Blast2go	peptidyl-prolyl cis-trans isomerase activity	GO:0003755	Molecular Function	82%
Blast2go	chloroplast thylakoid lumen	GO:0009543	Cellular Component	82%

Source	InterPros	Term	Type	e value	Identity
Sma3	Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain	IPR001179	-	0.0	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	C %	G %	T %	Probability
586		88	11	0.923564
645	11		88	0.923564
788	66		33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain