SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene2617

Length: 985 nt

Origin of reads: Biogeco1 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene2617

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	WS00733.B21.1_E16 WS-PS-N-A-8 Picea glauca cDNA clone WS00733_E16 3, mRNA sequence.	-	-	85%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	88%
Blast2go	uncharacterized protein	-	-	69%

Source	GOs	Term	Type	Identity
Blast2go	metabolic process	GO:0008152	Biological Process	69%
Blast2go	binding	GO:0005488	Molecular Function	69%
Blast2go	catalytic activity	GO:0003824	Molecular Function	69%
Blast2go	photosynthetic membrane	GO:0034357	Cellular Component	69%
Blast2go	mitochondrion	GO:0005739	Cellular Component	69%

Full-Lengther Next Prediction

SNPs (tot: 23)

Position	A %	C %	G %	T %	Probability
98		50	50		1.0
99			50	50	1.0
100		50	50		1.0
105	80			20	0.995493
110		80		20	0.995493
115		20	80		0.995493
120	80		20		0.995493
147	80		20		0.995493
161	20			80	0.995493
167		80	20		0.995493
174	60	40			1.0
241	66			33	1.0
279	66	33			1.0
318	50	50			1.0
359	66	33			0.997452
368		80		20	0.995493
402		33		66	1.0
466		85		14	0.993533
477			33	66	1.0
626		57	42		1.0
714	25		75		0.996473
742	25		75		0.996473
908	66		33		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain