SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene92193

Length: 970 nt

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene92193

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Putative oxylase protein (Fragment) n=1 Tax=Pinus pinaster RepID=Q8VX86_PINPS	-	-	77%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	79%
Blast2go	protein srg1	-	-	71%

Source	InterPros	Term	Type	e value	Identity
Sma3	Isopenicillin N synthase	IPR002283	-	0.0	-
Sma3	Oxoglutarate/iron-dependent oxygenase	IPR005123	-	0.0	-

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NSV2

Fln msg: Distance to subject end: 27 aas, atg_distance in limit (1-15): atg_distance = 16, W2: There is no M at the beginning, your sequence is shorter than subject: 323 - 366

Fln protein: VFILSPEHRPNAKYCDFTLDQIPLIDLSPINSPTPPSPTTLDSLVTQIHAACRDWGFFQVINHGVSPHFLQTILSEAANFFSLPMQEKCKVRRDFENPLGYYDTELTKNVRDWKEVFDFTCRGITYLPASSDLDSHETIALTNQWPEDPPRLRQACEKYADAVEKLSFRLLELISLSLGLPAEYFNSKFEDHTSFLRLNHYPPCPVPELALGVSRHKDVGGLTVLAQDEVGGLQVRRKDGEWIGVKPVPNSSSSTWGLHAGLSNDKYESVEHRVVVNDKRERFSIPLFFNPSQHVMLGPVPELVNEENPPRYKEFNWGKFYKR

Protein Length: 324

Fln nts: GTTTTCATCCTCTCTCCAGAGCACCGCCCAAACGCCAAATACTGCGACTTCACTCTTGATCAAATTCCGCTCATAGATCTCTCCCCTATCAACTCCCCCACTCCACCATCCCCAACCACCTTGGACTCCCTCGTCACTCAAATACACGCAGCTTGCAGGGACTGGGGATTCTTCCAAGTCATCAACCATGGCGTCTCTCCCCATTTCCTCCAAACAATCCTATCGGAAGCGGCCAATTTCTTCTCCCTCCCCATGCAGGAAAAATGCAAAGTGAGAAGAGATTTCGAGAATCCACTAGGCTATTATGACACAGAGCTCACAAAGAACGTCAGGGACTGGAAAGAGGTCTTCGATTTCACATGCCGAGGCATAACTTATCTTCCTGCAAGTTCTGATCTCGACTCGCACGAGACAATAGCACTGACTAATCAATGGCCGGAAGACCCACCTCGCCTAAGGCAGGCCTGTGAGAAATATGCAGATGCCGTGGAGAAATTGTCATTCAGATTGCTGGAACTCATATCTCTGAGCCTAGGGTTGCCAGCTGAGTATTTCAATTCAAAGTTTGAGGACCACACTTCGTTTCTGAGGTTGAATCATTATCCGCCATGCCCTGTGCCAGAGCTGGCTCTCGGGGTTAGTCGTCATAAGGATGTGGGGGGTCTCACTGTGCTGGCTCAGGATGAGGTTGGAGGACTGCAAGTCAGGCGAAAAGATGGAGAATGGATTGGAGTGAAGCCTGTTCCCAATTCTTCGTCATCAACGTGGGGATTGCATGCAGGTTTGAGCAATGACAAATATGAGAGTGTCGAACATAGGGTAGTGGTCAATGACAAGAGGGAAAGGTTCTCTATTCCATTATTTTTTAATCCTTCGCAGCATGTGATGTTGGGACCTGTACCTGAGCTGGTGAATGAGGAAAATCCTCCCAGATATAAAGAATTCAACTGGGGGAAGTTCTACAAGAGGA

Fln Alignment:

uma_euler_28682___FILSPEHRPNAKYCDFTLDQIPLIDXXXXXXXXXXXXXXXXXXXXQIHAACRDWGFFQVINHGVSPHFLQTILSEAANFFSLPMQEKCKVRRDFENPLGYYDTELTKNVRDWKEVFDFTCRGITYLPASSDLDSHETIALTNQWPEDPPRLRQACEKYADAVEKXXXXXXXXXXXXXXXPAEYFNSKFEDHTSFLRLNHYPPCPVPELALGVSRHKDVGGLTVLAQDEVGGLQVRRKDGEWIGVKPVPNSSSSTWG-LHAGLSNDKYESVEHRVVVNDKRERFSIPLFFNPSQHVMLGXXXXXXXXXXXXRYKEFNWGKFYKR
A9NSV2_______________FIQSPEHRPNAKHCDFTLDQIPLIDLSPLSPTSPPHPTTLDSLVAQIHAACRDWGFFQVINHGVSPHLLHTVQSEAANFFSLPMQEKTKVRRDFDNPLGYYDTELTKNVRDWKEVFDFACRGTIRLPSSFEHESDEIRTSTNQWPQNPPRLREACEKYAEAMEKLSFRLLELISRSLGLPADYFNSKFEEHTSFLRLNHYSPCPVPELALGVGRHKDPGALTVLAQDEVGGLQVKRKDGEWIGVKPIPDSFVINLGDCMQVWSNDKYESVEHRVVVNDKRERFSVPFFLFPSHYVMVGPVPDLVNEKNPSRYKEFSWGKFFKR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain