SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene91555

Length: 1024 nt

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene91555

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	uncharacterized protein [Arabidopsis thaliana] sp\|Q9SUC9.1\|UGPI7_ARATH RecName: Full=Uncharacterized GPI-anchored protein At4g28100; Flags: Precursor emb\|CAB36779.1\| hypothetical protein [Arabidopsis thaliana] emb\|CAB79612.1\| hypothetical protein [Arabido	-	-	61%
FL-Next	sp=Uncharacterized GPI-anchored protein At4g28100; Arabidopsis thaliana (Mouse-ear cress).	-	-	61%
Blast2go	uncharacterized gpi-anchored protein at4g28100-like	-	-	70%

Source	GOs	Term	Type	e value	Identity
Blast2go	anchored to plasma membrane	GO:0046658	Cellular Component	0.0	70%

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: sp_plants

Fln subject: Q9SUC9

Fln msg: atg_distance in limit (1-15): atg_distance = 15, Unexpected STOP codon in 5 prime region,

Fln protein: SETGIGIPEVEEPVSSNYTIPAIPVDQQEKKTCHLDLSDELFGGVKEACVNGRKGLLDRSRCCPVLAAWLYAAHARTALQAASPPVSSSDLQPLRPDDSQACVNSLQSSLKTRGINIPSPNASCDPILCFCGVRLHHVSSLSCPNAFNISTHGHNAATPLSAVRALESNCTSPSHHGCTNCLRALQKINGSPGKNGHYSERTSRIYNKDCELMGLTWLLAKNKTAYIPTVSAVLRALVYTTHPANQSQCSPDQENMPLALDSLQVDNSSSSAIRIHFGGAATVFYATTLLLLSQSL*

Protein Length: 298

Fln nts: TAAAGCGAAACAGGAATTGGAATTCCAGAGGTGGAGGAGCCAGTGAGTTCGAATTACACCATCCCTGCAATTCCAGTTGATCAGCAGGAGAAAAAGACGTGTCACCTCGACCTCTCAGACGAACTGTTCGGAGGCGTGAAGGAGGCTTGCGTTAATGGCCGAAAGGGGCTTCTTGACAGGAGCCGCTGCTGCCCTGTTTTGGCCGCCTGGTTGTATGCTGCCCACGCCCGAACTGCGCTCCAAGCGGCATCCCCGCCCGTCTCGTCGTCTGACTTGCAGCCTCTCCGTCCCGACGATTCGCAGGCGTGTGTGAATAGCTTGCAGAGCTCTCTGAAGACCCGAGGCATCAATATCCCCAGCCCCAATGCTTCTTGCGATCCAATACTCTGTTTCTGCGGCGTAAGGCTCCACCATGTTAGCTCGCTTAGCTGTCCGAACGCGTTCAATATCTCCACCCATGGGCACAATGCAGCCACGCCCCTCTCTGCAGTTCGAGCCCTGGAGAGCAACTGCACTAGCCCGTCTCACCATGGATGCACTAACTGCCTCAGGGCACTCCAGAAGATCAATGGCAGTCCAGGCAAGAATGGGCATTACTCTGAGAGAACCAGCAGAATATACAACAAAGACTGTGAATTAATGGGGTTAACATGGTTACTAGCAAAGAACAAGACTGCATATATTCCCACCGTTTCTGCAGTGCTCAGGGCTCTCGTATACACTACCCACCCGGCCAACCAGTCACAGTGCAGTCCAGACCAAGAAAATATGCCCCTCGCCCTTGATTCTCTTCAGGTCGACAACTCTTCTTCTTCTGCCATCAGAATCCACTTTGGTGGTGCTGCAACAGTTTTCTACGCCACCACACTTCTCCTGCTTTCACAGTCCCTGTAG___CCTGTCCTCATTCCCGAGCCTGCTCGGGCAGGTCTCGAACCTTTGACCTATTGAATGTATCTACTGAGATATACACACATACCAGCTGTGCCCTGCTCTGTTATTTTTGCTGTCACTGCCATTGTAATCA

Fln Alignment:

uma_euler_10733___EPVSSNYTIPAIPVDQQEKKTCHLDLSDELFGGVKEACVNGRKGLLDRSRCCPVLAAWLYAAHARTALQAASP---PVSSSDLQPLRPDDSQACVNSLQSSLKTRGINIPSPNASCDPILCFCGVRLHHVSSLSCPNAFNISTHGHNAATPLSAVRALESNCTSPSHHGCTNCLRALQKINGSPGKNGHYSERTSRIYNKDCELMGLTWLLAKNKTAYIPTVSAVLRALVYTTHPANQSQCSPDQENMPLALDSLQVDNSSSSA
Q9SUC9_______________EPVQPN-TVPAFPVETQAQ-SCRLDLSNELFGGVNEAC--GRN--LDRSRCCPVLAAWLFAAHARSALQLPAPAPTPESSDPDEPMKPDDSQKCVNTLQSALLTKQIKIPQPNSSCDAILCFCGIRLHQISSLSCPAAFNVSS-GFKNATPTAAVKNLEKECRNSSYSGCTRCLGALQKLKVRGGNKKTTTERGTKMMSKDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSPHPPHLNKCSPDQENMPLAVDSLQFQKSFSSS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain