SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene91321

Length: 471 nt

UniGene Fasta

>sp_v2.0_unigene91321
CAACCGGTTTCGGATTGTGTTACAATGTGTCTGGTGTAGAGAATATTCAGTTGCCTAAATTTGCATTTCATTTCAAGGGTGGCTCAGATATGGTACTGCCTGTTGCCAACTATTTGACATATTTTAGCAGTTTTGATTCGACCTGCTTGACGATGATCAGCAGCAAAGGGATCTTGGACGATGATTTTGGCCCTGCTGTGATCCTGGGAAATTATCAGCAGCAGGACTTTTATATATTGTACGACAGAGAGAAGAATCGTTTAGGGTTCACTCAACAAACTTGCCAGACATCCGGCTGAACAAATGAACATGTCATTTTGCCGCAGGTTAAGTTATTGTCAGATAATGCAGGTTGAATAAATAAATTACATTCTGTCGGATTCTTGGCCGGAGTAATGAAACTGCACAGCGTGCCCTTTGCTAGTATTTAAATTGTAAGTTTGATTATTAATGAATTCCACCCAATCCCTG

Ace file of the UniGene sp_v2.0_unigene91321

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	aspartyl protease family protein [Arabidopsis thaliana] gb\|AAK25903.1\|AF360193_1 unknown protein [Arabidopsis thaliana] emb\|CAB43423.1\| putative protein [Arabidopsis thaliana] gb\|AAK64083.1\| unknown protein [Arabidopsis thaliana] gb\|AAK96717.1\| Unknown pr	-	-	2.0e-18	42%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	82%
Blast2go	aspartic proteinase nepenthesin-2-like	-	-	0.0	66%

Source	GOs	Term	Type	e value	Identity
Blast2go	membrane	GO:0016020	Cellular Component	0.0	66%
Blast2go	plant-type cell wall	GO:0009505	Cellular Component	0.0	66%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: D5AC09

Fln msg: your sequence is shorter than subject: 99 - 370

Fln protein: TGFGLCYNVSGVENIQLPKFAFHFKGGSDMVLPVANYLTYFSSFDSTCLTMISSKGILDDDFGPAVILGNYQQQDFYILYDREKNRLGFTQQTCQTSG*

Protein Length: 100

Fln nts: CAACCGGTTTCGGATTGTGTTACAATGTGTCTGGTGTAGAGAATATTCAGTTGCCTAAATTTGCATTTCATTTCAAGGGTGGCTCAGATATGGTACTGCCTGTTGCCAACTATTTGACATATTTTAGCAGTTTTGATTCGACCTGCTTGACGATGATCAGCAGCAAAGGGATCTTGGACGATGATTTTGGCCCTGCTGTGATCCTGGGAAATTATCAGCAGCAGGACTTTTATATATTGTACGACAGAGAGAAGAATCGTTTAGGGTTCACTCAACAAACTTGCCAGACATCCGGCTGA___ACAAATGAACATGTCATTTTGCCGCAGGTTAAGTTATTGTCAGATAATGCAGGTTGAATAAATAAATTACATTCTGTCGGATTCTTGGCCGGAGTAATGAAACTGCACAGCGTGCCCTTTGCTAGTATTTAAATTGTAAGTTTGATTATTAATGAATTCCACCCAATCCCTG

Fln Alignment:

uma_euler_6570___TGFGLCYNVSGVENIQLPKFAFHFKGGSDMVLPVANYLTYFSSFDSTCLTMISSKGILDDDFGPAVILGNYQQQDFYILYDREKNRLGFTQQTCQT
D5AC09_______________TGMGLCYDVTGLENIVLPEFAFHFKGGSDMVLPVANYFSYFSSFDSICLTMISSRGLLEVDSGPAVILGNDQQQDFYLLYDREKNRLGFTQQTCKT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain