SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene89107

Length: 953 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene89107 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	42%
Blast2go	protein	-	-	1.11379e-09	89%

Source	InterPros	Term	Type	e value	Identity
Sma3	SNARE associated Golgi protein	IPR015414	-	0.0	-

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: B8LP89

Fln msg: Warning!, your query overlaps and the subject is separated, your sequence is shorter than subject: 118 - 280. Was predicted as Complete, but is very much shorter than de subject

Fln protein: MATSNSSSSENLNGKSDSETGATRFLLTQFELVAAISIFCVLSLGLICTYWTMPAAEYQFLKVPRSIEEIQFxxxGLALGELRSLGDLYDFKTIATLFFIGMISIIPTLVNRNKKTA*

Protein Length: 119

Fln nts: TCGTGACCTTGGCTGTCACTCAGAGTCTCGGGGTTTCGCGTACTCCTTTTTCTGCAATTCTTTCCAATGTTATATATCGAAGAAAGTAAAACAACGACATTGTGAAGGTCGAGGGTTCGGATCTATCTTACATCTGTTCGACCTTCACA_-_ATGGCAACTTCCAACAGTTCCAGCTCTGAGAATCTTAATGGAAAATCTGATAGTGAAACGGGCGCAACCAGGTTTCTTCTGACGCAATTCGAATTGGTGGCCGCGATTAGCATTTTCTGTGTTTTGTCGTTAGGGTTGATATGTACATATTGGACCATGCCTGCTGCCGAATACCAGTTTCTTAAAGTTCCTCGTTCCATTGAAGAAATTCAATTTxxxxxxxxxGGCCTCGCTCTTGGAGAGTTAAGATCCCTGGGCGACTTATATGATTTCAAGACAATTGCTACATTATTTTTTATTGGCATGATCTCTATCATTCCTACTCTTGTTAACAGGAACAAGAAAACAGCATGA___AGCTGATCTTCCATACTGTAATTTTATCATTGTTTTATAAATGAACTCGAGCCCCAGTTTACATGCGGGAGTTCTGCCACATCTCTATTTCATTCATCTTGTTCAGAATATATTTCTGCTGCTGGTTAATTGGATTTCATCTTGTAGGGTCACAGTTGTATTCGCTAAATTCTTGCTCTGTAACATAAGCTTTCTTGTAAAATTGGTTTTCGTTCCCGTGCTGGGACATACCTGAGTTTTGGAGGTTGTTCAAAGGCGGGGACAATGTTAAAAGCCCCTAGCAACTAATGTAAGCGTCCCTTTCATTTTGAGAGGGTCTGTTGAAAGGTAATAACCATGTTGAAATTCTAACAGCGAATGTGGTTTGAAGCAGTAGCATCAGAATCAAAGATCTATGCTGCTCGTCACTAAATGGGTAAAGGTGGATATGCTCTACATTCAATATTATGTT

Fln Alignment:

uagpf_euler_15455___SSSSENLN-GKSDSETGATRFLLTQFELVAAISIFCVLSLGLICTYWTMPAAEYQFLKVPRSIEEIQFVKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxQAGLALGELRSLGDLYDFKTIATLFFIGMISIIPTLVNRNK
B8LP89_______________SPTSEKLHDGKPEG-----RFPLTRWEFVAALTIFMLFAIGLLSIYVTMPEADYEILKLPHSIPDLRLLKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRAGLALGELRSVADLYDSRTIAVLFFIGLVSVAPTIVSRKQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain