SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene86051

Length: 1370 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene86051 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Fumarylacetoacetase [Medicago truncatula]	-	-	68%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	93%
Blast2go	protein	-	-	82%

Source	InterPros	Term	Type	Identity
Sma3	Fumarylacetoacetase, C-terminal	IPR002529	-	-
Sma3	Immunoglobulin/major histocompatibility complex, conserved site	IPR003006	-	-
Sma3	Fumarylacetoacetase	IPR005959	-	-
Sma3	Fumarylacetoacetase, C-terminal-related	IPR011234	-	-
Sma3	Fumarylacetoacetase, N-terminal	IPR015377	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: D5ABT0

Fln msg: your sequence is shorter than subject: 393 - 424

Fln protein: AAEARPGVAIGEYVLDLSVLSRAGLFNGPLLSRSDCFLQPSLNAFMAMGKPAWKEARGTIQKLLSVDEPVLRDNVELQKSALLPMSQVQLMLPAVIGDYTDFFTSKYHTMNCGIIFRGPENPLPPNWLHLPVAYHGRASSVVISGTDLHRPRGQKRPMGTPTPGFGPSVKLDFELEMAMLVGPGNELGTSVSVDDAADHIFGLVLMNDWSARDIQAWEYQPLGPFLGKSFGTSISPWIVTLEALEPFTCEALVQDPPPLPYLTGKSSRTYDIPLEVALKPAGEEKASVICKSNFKHLYWTIEQQLAHHTINGCNLRSGDLLGSGTISGPEPESFASLLELSWDGKKPLKLGNNISRTFVEDGDEVILTACCQGDGYKVGFGTCSGKILPAIS*

Protein Length: 394

Fln nts: GCGGCCGAAGCGCGCCCTGGTGTGGCCATTGGCGAGTATGTGTTGGACCTCAGTGTTCTGTCTCGAGCTGGCCTTTTCAATGGACCTCTGCTCAGTAGATCCGACTGCTTCCTTCAGCCATCTCTGAATGCTTTCATGGCTATGGGAAAGCCTGCATGGAAGGAGGCACGCGGAACAATTCAGAAACTTTTGTCAGTTGATGAACCAGTCTTGCGAGATAATGTCGAATTGCAGAAAAGTGCATTGTTACCAATGAGTCAGGTTCAGTTGATGCTGCCTGCTGTAATAGGGGACTATACAGACTTCTTTACCTCCAAGTATCATACAATGAACTGTGGAATCATATTTCGTGGTCCTGAAAATCCTCTTCCTCCAAACTGGCTTCATCTTCCAGTTGCATATCATGGGAGAGCATCCTCTGTTGTTATCTCTGGAACAGATCTTCACAGACCTAGAGGTCAAAAACGTCCAATGGGCACACCTACACCAGGATTTGGACCAAGTGTGAAACTTGATTTTGAGCTAGAAATGGCTATGCTGGTTGGACCTGGAAATGAGTTGGGAACGTCTGTGAGTGTGGATGATGCAGCTGATCATATTTTTGGGCTGGTTCTAATGAATGATTGGAGTGCAAGGGATATACAGGCGTGGGAATATCAACCACTTGGGCCATTTTTGGGAAAGAGCTTTGGAACAAGCATCTCACCCTGGATTGTCACTCTAGAGGCCTTAGAACCTTTCACCTGTGAAGCACTTGTACAGGATCCACCTCCCCTGCCCTATCTCACTGGGAAAAGTAGCAGGACCTATGATATCCCTTTAGAGGTTGCCTTAAAACCAGCCGGGGAAGAGAAAGCTTCTGTTATTTGTAAGAGCAACTTTAAACACCTATATTGGACAATTGAACAACAACTTGCACACCATACCATCAATGGTTGTAATTTGAGGTCTGGAGATTTGCTAGGATCTGGAACCATAAGTGGGCCTGAGCCTGAAAGTTTTGCTTCCCTATTAGAGCTATCATGGGATGGGAAGAAGCCACTGAAACTTGGAAATAATATCTCTCGAACATTTGTGGAAGATGGTGATGAGGTCATTTTAACAGCATGCTGTCAGGGAGATGGATATAAGGTGGGCTTTGGTACATGCTCTGGAAAGATACTACCTGCAATTTCCTGA___CCAGTAAAGTTATAATCTTTGTTTCCTATTATATGGCACATCTTCAAGACTCTGTTGGGTGAATTCTTTTAGGGAGGCTCAATTGTGATATAGTATGTGCTTCAGCAGGACATTATTTATTGGTAATTCTATTCTAGGTAATGAACTAAAAGCAGCAGAATTGTCAAAGGAATTGGCTAATTTTGTAATTG

Fln Alignment:

biogeco3_euler_14294___EARPGVAIGEYVLDLSVLSRAGLFNGPLLSRSDCFLQPSLNAFMAMGKPAWKEARGTIQKLLSVDEPVLRDNVELQKSALLPMSQVQLMLPAVIGDYTDFFTSKYHTMNCGIIFRGPENPLPPNWLHLPVAYHGRASSVVISGTDLHRPRGQKRPMGTPTPGFGPSVKLDFELEMAMLVGPGNELGTSVSVDDAADHIFGLVLMNDWSARDIQAWEYQPLGPFLGKSFGTSISPWIVTLEALEPFTCEALVQDPPPLPYLTGKSSRTYDIPLEVALKPAGEEKASVICKSNFKHLYWTIEQQLAHHTINGCNLRSGDLLGSGTISGPEPESFASLLELSWDGKKPLKLGNNISRTFVEDGDEVILTACCQGDGYKVGFGTCSGKILPAIS
D5ABT0_______________QPRPGVAIGEYVLDLSALARAGLFHGPVLKGSDCFLQPSLNAFMAMGKPAWKEARGTIQKLLSVDEPALRDNAELQKSALLPMSQVQLMLPAVIGDYTDFFTSKYHTMNCGIIFRGPESPLPPNWLHLPVAYHGRASSVVISGTDLHRPRGQKRPVGKPTPGFGPSAKLDFELEMAMLVGPGNELGTSVSVDDAADHIFGLVLMNDWSARDIQAWEYQPLGPFLGKSFGTTVSPWIVTLEALQPFTCEAPVQDPPPLPYLTGKSCRTYDIPLEVALKPAGEDKSSVVCKSNFKHLYWTIEQQLAHHTINGCNLRPGDLLGSGTISGPEPESFGSLLELSWDGKNPLKLGNNISRTFVEDGDEVILTACCQGDGYKVGFGTCSGKILPAIS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain