SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene85895

Length: 894 nt

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene85895

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	2-deoxyglucose-6-phosphate phosphatase, putative n=1 Tax=Ricinus communis RepID=B9S4C2_RICCO	-	-	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	96%
Blast2go	haloacid dehalogenase-like hydrolase	-	-	81%

Source	InterPros	Term	Type	e value	Identity
Sma3	Haloacid dehalogenase-like hydrolase	IPR005834	-	0.0	-
Sma3	HAD-superfamily hydrolase, subfamily IA, variant 3	IPR006402	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NVF8

Fln msg: Warning!, your query overlaps and the subject is separated, your sequence is shorter than subject: 274 - 360

Fln protein: DSNGTFPTSKNLFMQEAIGAEHGEAFEAYRPNGPLKVDVDFLNDRMRESGLQRIRYAMKPDEAFGLIFSWDNVVADTRTLRIYAWNQLASEEGKTIPKDGETQRLMLSAGAEYVLCKILCWGEAGNEAERLKMRLSEIFYEELLKLQAPMEGLKEWLEALYTAGVPCAVASSLDRYNLLAALQRMGLRKYFQAIVSDEDGMExxxxxMAVALIGSHPAYELVQADLAVANFSELSVINLRRLFANKGCEFMDLQKQNVEESPTKKKLIIDTLF*

Protein Length: 275

Fln nts: CGATTCCAATGGCACCTTCCCAACATCAAAAAATCTCTTCATGCAAGAGGCTATTGGAGCTGAGCATGGAGAGGCTTTTGAAGCTTATAGACCAAATGGACCATTAAAAGTTGATGTGGATTTCCTAAATGACCGAATGCGTGAAAGTGGCCTTCAAAGAATACGATATGCTATGAAACCTGATGAAGCATTTGGTCTTATTTTTTCCTGGGACAATGTTGTGGCAGATACTCGGACTCTCAGGATATATGCTTGGAATCAACTTGCTTCTGAAGAAGGTAAAACCATTCCGAAAGATGGTGAGACGCAACGTTTGATGCTTTCTGCTGGTGCTGAGTATGTCTTATGTAAGATTCTTTGCTGGGGAGAAGCTGGAAATGAAGCCGAGAGGCTGAAAATGCGTCTGTCAGAAATTTTCTACGAGGAATTATTAAAATTACAAGCACCCATGGAGGGATTAAAGGAGTGGCTGGAAGCACTTTATACGGCTGGTGTGCCATGTGCAGTTGCATCATCCTTAGATCGCTACAATCTACTTGCAGCTCTTCAAAGAATGGGACTTCGAAAATATTTTCAGGCTATAGTGTCAGACGAAGATGGAATGGAGxxxxxxxxxxxxxxxATGGCAGTTGCTTTGATTGGTTCTCATCCTGCATATGAACTAGTGCAGGCCGATCTTGCTGTAGCCAACTTTAGCGAACTTTCTGTCATCAACTTGCGGAGATTATTTGCAAATAAAGGTTGTGAATTCATGGATTTACAAAAGCAAAATGTTGAGGAAAGCCCAACCAAGAAAAAGCTCATCATTGACACACTTTTTTAGGATATCAAGGACTTGATGCGACATGGAAGTCGGCTTCACTGAAAATTTTAGAGACTGTGCATGCCATTTTGC

Fln Alignment:

biogeco3_euler_8673___DSNGTFPTSKNLFMQEAIGAEHGEAFEAYRPNGPLKVDVDFLNDRMRESGLQRIRYAMKPDEAFGLIFSWDNVVADTRTLRIYAWNQLASEEGKTIPKDGETQRLMLSAGAEYVLCKILCWGEAGNEAERLKMRLSEIFYEELLKLQAPMEGLKEWLEALYTAGVPCAVASSLDRYNLLAALQRMGLRKYFQAIVSDEDGMESIAQxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxNCTMMAVALIGSHPAYELVQADLAVANFSELSVINLRRLFANKGCEFMDLQKQNVEESPTKKKLIIDTLF
A9NVF8_______________DSNGAYPTSKNLFMQEAIGAEHGEAFEAYRPNGPLKVDVDFLNDRMRESGLQRIRYAMKPDEAFGLIFSWDNVVADTRTLRIDAWNQLASEEGKTIPKDGETQRWMLSAGAEYVLCKILCWGEAGNEVERLKMRLSEIFYEELLKLQAPMDGLKEWLEALYTAGVPCAVASSLDRQNLLAALQRMGLRKYFQAIVSDEDGMESIAQxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxNCTMMAVALIGSHPAYELVQADLAVASFNELSVINLRRLFANKGCEFMDLQKQNVEESPSKKKLIIDTLF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain