SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene85755

Length: 1139 nt

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene85755

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Metal tolerance protein n=3 Tax=Malpighiales RepID=A4ZUV2_POPTR	-	-	78%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	90%
Blast2go	metal tolerance protein	-	-	88%

Source	GOs	Term	Type	Identity
Blast2go	response to copper ion	GO:0046688	Biological Process	88%
Blast2go	cellular manganese ion homeostasis	GO:0030026	Biological Process	88%
Blast2go	response to manganese ion	GO:0010042	Biological Process	88%
Blast2go	manganese ion transmembrane transport	GO:0071421	Biological Process	88%
Blast2go	manganese:hydrogen antiporter activity	GO:0010486	Molecular Function	88%
Blast2go	Golgi apparatus	GO:0005794	Cellular Component	88%
Blast2go	late endosome	GO:0005770	Cellular Component	88%

Source	InterPros	Term	Type	Identity
Sma3	Toll/interleukin-1 receptor homology (TIR) domain	IPR000157	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	NB-ARC	IPR002182	-	-
Sma3	Cation efflux protein	IPR002524	-	-
Sma3	Leucine-rich repeat, typical subtype	IPR003591	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NTR8

Fln msg: Unexpected stop codon in the beginning of your sequence, your sequence is shorter than subject: 249 - 401

Fln protein: YSLVHCI*DEVRKSLPYPIGKKRMQPLGIMVFASVMATLGLAILLESIRQLLSKEHNLSLEGGGWHWVVGIMVSVTIVKLVLVIYCRSFTNEIVKAYAQDHFFDVITNTIGLIAAILASSTQYRWIDPAGAIVLALYTIRTWSSTVLENVNSLVGKTASPDYLQKLTYLCWNHHKAILHIDTVRAYTFGSHYFVEVDIVLPRDMPLHKAHDIGEALQEKLESLPDIERAFVHLDYEYSHRPEHGKSYS*

Protein Length: 250

Fln nts: TTATTCTTTGGTTCACTGCATTTAAGATGAAGTCAGAAAATCCTTACCGTATCCTATTGGGAAGAAACGTATGCAACCACTGGGAATTATGGTTTTTGCTTCAGTGATGGCTACATTGGGATTAGCAATCTTACTAGAGTCTATTCGACAACTTTTATCCAAGGAGCATAATTTATCTTTAGAAGGTGGTGGATGGCATTGGGTGGTTGGTATCATGGTTTCAGTCACTATTGTGAAGTTGGTCCTTGTAATCTATTGTCGAAGTTTTACTAATGAGATTGTGAAGGCATATGCTCAAGATCATTTCTTTGATGTGATCACCAACACAATTGGTCTAATTGCTGCTATTCTTGCAAGTAGTACTCAATACCGGTGGATAGATCCTGCTGGAGCAATTGTGCTGGCTCTCTACACAATCAGAACATGGTCAAGCACGGTTTTGGAAAATGTGAATTCGTTGGTTGGGAAAACAGCTTCACCTGATTATTTGCAGAAGTTGACATATCTCTGTTGGAATCATCACAAAGCAATTCTGCATATTGATACAGTGAGAGCTTACACATTTGGTTCTCATTATTTTGTTGAGGTAGACATTGTGCTACCCAGGGATATGCCTTTACACAAGGCTCATGACATTGGTGAAGCACTTCAGGAAAAACTGGAATCTCTTCCTGACATAGAACGGGCTTTTGTGCATTTAGATTATGAATATAGTCACAGACCTGAGCATGGGAAAAGCTACTCCTAA___CTCTGTATGTGAGTGTCATTTTATAATTGAAACTTCGTAATCTGCTTTTCAGGTCTTCTTTTATTCTTCCACTGGTATCATTCTCATCCTAGGATGTGATGGTAAAGTGATATTGTGGTAGTTGTAGATCTGCCATCTTGACCTACAAGTTAGCAGATTTTGCTCCGAGAAAATTGCATACAGAAATCAACACTGCATGTATGTTAACACTTCCTAATATCTTGGGTTCTATATAATGGCTTGGTTAAAATTGATTAATTTTCTTTTTGAAACATTTGTTGTCAAGCTTAGCTGAATAATCTATTTCTTAAAGCTCAGGGTTATATGGACTATAAACTTGAACAATGTTTCTTGTTTTCTGAATATACCATGTGATATTTGTATTTGCATC

Fln Alignment:

biogeco3_euler_3694___YPIGKKRMQPLGIMVFASVMATLGLAILLESIRQLLSKEHNLSLEGGGWHWVVGIMVSVTIVKLVLVIYCRSFTNEIVKAYAQDHFFDVITNTIGLIAAILASSTQYRWIDPAGAIVLALYTIRTWSSTVLENVNSLVGKTASPDYLQKLTYLCWNHHKAILHIDTVRAYTFGSHYFVEVDIVLPRDMPLHKAHDIGEALQEKLESLPDIERAFVHLDYEYSHRPEHGKSYS
A9NTR8_______________YPIGKKRMQPLGILVFASVMATLGLQILLECIRQLVYKEDGLSLDGDKWHWVVGIMVSVTLVKLFLVLYCRSFTNEIVKAFAQDHFFDVITNSIGLIAAILAS-TLYWWIDPAGAIVLALYTIRTWSSTVLENVNSLVGKTASPDYLQKLTYLCWNHHKAIRHIDTVRAYTFGSHYFVEVDIVLPSDMPLQKAHDIGEALQEKLESLPDIERAFVHLDYEYSHRPEHGKSYS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain