SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene84849

Length: 2241 nt

UniGene Fasta

>sp_v2.0_unigene84849
GGGAAACCGGCCGCTGATTGGCTGGACCACGTACACCCAGCCTTAAAATACACGGCGACCTTATGGTAATGGAAAAAACAACTCTATATATATGAGAGGAAGGATCAGATCAAATCCTACGACAAACATAGTTTGGCAAAGTGAAGTTGGATCTAGGGTTTTGCAGATACAGTCATGGCGATGCTACGTTGGGTTTTCTTGGCACTCATCTTGTTTTCGGTAGTAAATCTGTGTAAATCAGAAGCTGAAGAGCAAGGAAGCGAAGCAGTTCTTACGCTCGATGCAAACAGTTTCTCGGAGGCCCTTTCAAGCCATCCGTTCATTGTGGTGGAATTCTATGCCCCATGGTGTGGTCATTGTAAGCGTCTTGCTCCTGAGTATGAGAAAGCTGCAGCTATTCTTAAAAATCATGACCCACCCATTGTCTTGGCTAAAGTTGATGCTAATGAAGAAACAAATAAAGCTTTGGCTAGTGAATATGACGTAAAGGGATTTCCAACTCTGAAGATCATTCGGAAGGGAGGGTCAAGTGTTCAAGATTATAAAGGTCCTCGTGACGCAGATGGTATTGTGGAGTACTTGAAAAAGCAGGCTGGTCCCGCATCTGTGGAAATCAAATCTTCAGAAGAAGCCACTAGCCTTATTGGTGACAAGAAAGTATTCATAGTTGGAGTGTTCTCAAACTTTGAGGGCGAGGAATATACCAATTTCACTACTGTTACTGAGACAATGCGTTCAGAATATGATTTTGGTCATACATCCGATGCTACATTCCTTCCTTTGAAGAATTCTCCAATAAACCCACCATTTGTTCGGCTGTTTAAGCCTTTTGATGAGCAATATTCTGACTCCCAGGATTTCAATGTTGATTCATTAGAGAAGTTTGTTGAAGAAGCCAGTATTCCCCTTGTAGCAGTTCTGACTAAGGACCCTGAAAGTCATTCTCATGTTATCAAATTCTTCAACAGCCCAGATGCCAAGGCCTTGTTTTTTTGAATTTTACTGCGGACAATGCAGAGGAATTCAAAGTTACATATCAAGAGTTAGCAAAATCTCATAGAGGAAAAGGCATGAAATTTCTTCTTGCTGATCTTGAGGCTAGTCAAGGTGCTCTACAGTACTATGGAATTAAAGCTGAGGGTGTGCCATCGATCCTCATTCAAGATGCAGAAGATCGGAAGTATCTTAAGGAGACACTGGAAGTCGAACAGATATCATCTGTGTTGAAAGAATACTTTGATGGCACATTACCACAGTTCAGGAGATCTGAGCCCATCCCCGAAAAGAATGATGATCCTGTAAAAGTTGTTGTGGCAGATACTCTGCAAGAAATGGTCATCGATTCTGACAAAAATGTACTTGTGGAGTTCTATGCACCTTGGTGTGGACATTGCAAGAAACTGGCTCCCATTTTGGAAGAGGTGGCCATTTCCTATGAAAATGAAAGTGATGTGGTGATAGCTAAGCTGGATGCCACTAGTAATGATATTTCTACCAAGACCTTTAACATAAAGGGGTATCCAACATTATATATGGTCTCTGCAACTGGCAAGATTGTGAACTACGAGGGAGATAGATCAAAGGAGGACATCACCGACTTCATTAATAAAAACAGAGATTCTGTAAGCAAAGATGATATCGGAAAGGACGAATTGTGAAATGAGGACATGAAGTTCGTAACTGGGATGTGGCAGTATCCTGGGCCTAAGGAAACCGAGTTTTTTACCTTCTTTCAAGTGGCCCATTATTGGGGTCTTCGGAACTTTGTAAAGTTCAAGAGGAAATCATGTCTTGGTCTCTTGATCTTAGAGGACAACGCTTTTGCCATTAGCAGGAAAAGGATTAGCCCAATCTAAAGTAGGCTCTGCAGTCCTTAGTGCCTTTAATGAATTTAGTATGGTATTTATCTTTATAATAGTTAGATGAGAAGAAATAAGCATTCCCTTCGTTCGTGGATGGAATTACTCATATTTTTGTTTTGCCTATTTAAATTTCACATGGATTTTCTATAATCTATTGAACATCACATGATGAGAAGCTAGTCAAATTCATGTGTGAATGCAAGGAGTTGGGGAATTTTTCCTCAGTTTCCTAGTTGTAGTTTTCAAATTTCTTATGCTTCTATCATAAAGTCACAGGCAGAGTATGTACATGGTGTGACCGAATCTGCAGCATGGCTATGATTTATGTCAGAGGCTATGTATTCAACACCAGCAATGCATAAAAGACATAAAAATACGT

Ace file of the UniGene sp_v2.0_unigene84849

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	RecName: Full=Protein disulfide-isomerase; Short=PDI; Flags: Precursor gb\|AAD28260.1\|AF131223_1 protein disulfide isomerase homolog [Datisca glomerata]	-	-	59%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	89%
Blast2go	protein disulfide isomerase	-	-	77%

Source	InterPros	Term	Type	Identity
Sma3	Disulphide isomerase	IPR005788	-	-
Sma3	Protein disulphide isomerase	IPR005792	-	-
Sma3		IPR006662	-	-
Sma3	Endoplasmic reticulum, protein ERp29, C-terminal	IPR011679	-	-
Sma3		IPR012335	-	-
Sma3	Thioredoxin domain	IPR013766	-	-
Sma3		IPR017936	-	-
Sma3	Thioredoxin, conserved site	IPR017937	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NSV6

Fln msg:

Fln protein: MAMLRWVFLALILFSVVNLCKSEAEEQGSEAVLTLDANSFSEALSSHPFIVVEFYAPWCGHCKRLAPEYEKAAAILKNHDPPIVLAKVDANEETNKALASEYDVKGFPTLKIIRKGGSSVQDYKGPRDADGIVEYLKKQAGPASVEIKSSEEATSLIGDKKVFIVGVFSNFEGEEYTNFTTVTETMRSEYDFGHTSDATFLPLKNSPINPPFVRLFKPFDEQYSDSQDFNVDSLEKFVEEASIPLVAVLTKDPESHSHVIKFFNSPDAKALFF*

Protein Length: 275

Fln nts: GGGAAACCGGCCGCTGATTGGCTGGACCACGTACACCCAGCCTTAAAATACACGGCGACCTTATGGTAATGGAAAAAACAACTCTATATATATGAGAGGAAGGATCAGATCAAATCCTACGACAAACATAGTTTGGCAAAGTGAAGTTGGATCTAGGGTTTTGCAGATACAGTC_-_ATGGCGATGCTACGTTGGGTTTTCTTGGCACTCATCTTGTTTTCGGTAGTAAATCTGTGTAAATCAGAAGCTGAAGAGCAAGGAAGCGAAGCAGTTCTTACGCTCGATGCAAACAGTTTCTCGGAGGCCCTTTCAAGCCATCCGTTCATTGTGGTGGAATTCTATGCCCCATGGTGTGGTCATTGTAAGCGTCTTGCTCCTGAGTATGAGAAAGCTGCAGCTATTCTTAAAAATCATGACCCACCCATTGTCTTGGCTAAAGTTGATGCTAATGAAGAAACAAATAAAGCTTTGGCTAGTGAATATGACGTAAAGGGATTTCCAACTCTGAAGATCATTCGGAAGGGAGGGTCAAGTGTTCAAGATTATAAAGGTCCTCGTGACGCAGATGGTATTGTGGAGTACTTGAAAAAGCAGGCTGGTCCCGCATCTGTGGAAATCAAATCTTCAGAAGAAGCCACTAGCCTTATTGGTGACAAGAAAGTATTCATAGTTGGAGTGTTCTCAAACTTTGAGGGCGAGGAATATACCAATTTCACTACTGTTACTGAGACAATGCGTTCAGAATATGATTTTGGTCATACATCCGATGCTACATTCCTTCCTTTGAAGAATTCTCCAATAAACCCACCATTTGTTCGGCTGTTTAAGCCTTTTGATGAGCAATATTCTGACTCCCAGGATTTCAATGTTGATTCATTAGAGAAGTTTGTTGAAGAAGCCAGTATTCCCCTTGTAGCAGTTCTGACTAAGGACCCTGAAAGTCATTCTCATGTTATCAAATTCTTCAACAGCCCAGATGCCAAGGCCTTGTTTTTTTGA___ATTTTACTGCGGACAATGCAGAGGAATTCAAAGTTACATATCAAGAGTTAGCAAAATCTCATAGAGGAAAAGGCATGAAATTTCTTCTTGCTGATCTTGAGGCTAGTCAAGGTGCTCTACAGTACTATGGAATTAAAGCTGAGGGTGTGCCATCGATCCTCATTCAAGATGCAGAAGATCGGAAGTATCTTAAGGAGACACTGGAAGTCGAACAGATATCATCTGTGTTGAAAGAATACTTTGATGGCACATTACCACAGTTCAGGAGATCTGAGCCCATCCCCGAAAAGAATGATGATCCTGTAAAAGTTGTTGTGGCAGATACTCTGCAAGAAATGGTCATCGATTCTGACAAAAATGTACTTGTGGAGTTCTATGCACCTTGGTGTGGACATTGCAAGAAACTGGCTCCCATTTTGGAAGAGGTGGCCATTTCCTATGAAAATGAAAGTGATGTGGTGATAGCTAAGCTGGATGCCACTAGTAATGATATTTCTACCAAGACCTTTAACATAAAGGGGTATCCAACATTATATATGGTCTCTGCAACTGGCAAGATTGTGAACTACGAGGGAGATAGATCAAAGGAGGACATCACCGACTTCATTAATAAAAACAGAGATTCTGTAAGCAAAGATGATATCGGAAAGGACGAATTGTGAAATGAGGACATGAAGTTCGTAACTGGGATGTGGCAGTATCCTGGGCCTAAGGAAACCGAGTTTTTTACCTTCTTTCAAGTGGCCCATTATTGGGGTCTTCGGAACTTTGTAAAGTTCAAGAGGAAATCATGTCTTGGTCTCTTGATCTTAGAGGACAACGCTTTTGCCATTAGCAGGAAAAGGATTAGCCCAATCTAAAGTAGGCTCTGCAGTCCTTAGTGCCTTTAATGAATTTAGTATGGTATTTATCTTTATAATAGTTAGATGAGAAGAAATAAGCATTCCCTTCGTTCGTGGATGGAATTACTCATATTTTTGTTTTGCCTATTTAAATTTCACATGGATTTTCTATAATCTATTGAACATCACATGATGAGAAGCTAGTCAAATTCATGTGTGAATGCAAGGAGTTGGGGAATTTTTCCTCAGTTTCCTAGTTGTAGTTTTCAAATTTCTTATGCTTCTATCATAAAGTCACAGGCAGAGTATGTACATGGTGTGACCGAATCTGCAGCATGGCTATGATTTATGTCAGAGGCTATGTATTCAACACCAGCAATGCATAAAAGACATAAAAATACGT

Fln Alignment:

biogeco1_euler_12460___MAMLRWVFLALILFSVVNLCKSEAEEQ------GSEAVLTLDANSFSEALSSHPFIVVEFYAPWCGHCKRLAPEYEKAAAILKNHDPPIVLAKVDANEETNKALASEYDVKGFPTLKIIRKGGSSVQDYKGPRDADGIVEYLKKQAGPASVEIKSSEEATSLIGDKKVFIVGVFSNFEGEEYTNFTTVTETMRSEYDFGHTSDATFLPLKNSPINPPFVRLFKPFDEQYSDSQDFNVDSLEKFVEEASIPLVAVLTKDPESHSHVIKFFNSPDAK
A9NSV6_______________MAMLRWVTLALILFSVVSLCKSEAEAEAETEAEGGEAVLTLDANNFAEALSSHPFIVVEFYAPWCGHCKRLAPEYEKAAASLKNHDPPIVLAKVDANEETNKALASEYDVKGFPTLKIIRKGGASVQDYKGPREADGIVKYLKKQAGPASVEIKSSEEATSLIGDKKVFIVGVFSTFEGEEYTNFTTVTETLRSDYDFGHTSDATIIPLKDSPINPPFIRLFKPFDELYSDSQDFNVDSLEKFVEEASTPLIAVLTKDPDSHAHVIKFFNSPDAK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain