SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene84139

Length: 404 nt

UniGene Fasta

>sp_v2.0_unigene84139
AAAATTTGTTCTCCGACCAGAAACGCAGGCAGCCACAACAAGAATCCCCAACTTTCTGAATTCGGTGAAGCTACAGGAATGACAGTTGATTTACCTCCTGCCTTCGGGTGGGTAGCCTTGGCTGCTTTGGCATACGGACTGCTCAATGTCTGGATGATGAATCAGGTTGGAAAAGCTAGAAAACGATACAACGTCCCTTACCCGAAATTGTATGCCATTGAAAGTGAGAACAAGGATGCAAACATGTTCAACTGTGTTCAGCGAGGACATCAGAACTGTCTGGAGAATATGCCTGTATTCTTTGTGGTCCTCATTTTGGGTGGCTTACAGCACCCTATAGCCTCCGCCATTTTCGGTATGTTGTATACTGTTGCACGGTATTTCTACTTCACAGGCTATTCAAC

Ace file of the UniGene sp_v2.0_unigene84139

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	MAPEG family, putative [Oryza sativa Japonica Group]	-	-	1.0e-34	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	84%
Blast2go	glutathione s-transferase	-	-	0.0	79%

Source	GOs	Term	Type	Identity
Blast2go	membrane	GO:0016020	Cellular Component	79%
Blast2go	vacuole	GO:0005773	Cellular Component	79%
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	79%

Source	InterPros	Term	Type	e value	Identity
Sma3	Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein	IPR001129	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NS82

Fln msg: Distance to subject end: 39 aas, your sequence is shorter than subject: 108 - 148

Fln protein: MTVDLPPAFGWVALAALAYGLLNVWMMNQVGKARKRYNVPYPKLYAIESENKDANMFNCVQRGHQNCLENMPVFFVVLILGGLQHPIASAIFGMLYTVARYFYFTGYS

Protein Length: 109

Fln nts: AAAATTTGTTCTCCGACCAGAAACGCAGGCAGCCACAACAAGAATCCCCAACTTTCTGAATTCGGTGAAGCTACAGGA_-_ATGACAGTTGATTTACCTCCTGCCTTCGGGTGGGTAGCCTTGGCTGCTTTGGCATACGGACTGCTCAATGTCTGGATGATGAATCAGGTTGGAAAAGCTAGAAAACGATACAACGTCCCTTACCCGAAATTGTATGCCATTGAAAGTGAGAACAAGGATGCAAACATGTTCAACTGTGTTCAGCGAGGACATCAGAACTGTCTGGAGAATATGCCTGTATTCTTTGTGGTCCTCATTTTGGGTGGCTTACAGCACCCTATAGCCTCCGCCATTTTCGGTATGTTGTATACTGTTGCACGGTATTTCTACTTCACAGGCTATTCAAC

Fln Alignment:

biogeco1_euler_720___MTVDLPPAFGWVALAALAYGLLNVWMMNQVGKARKRYNVPYPKLYAIESENKDANMFNCVQRGHQNCLENMPVFFVVLILGGLQHPIASAIFGMLYTVARYFYFTGYS
A9NS82_______________MAVDLPPAFGWVVLTAVAYGVLNVWMSIQVGKARKRYNVPYPKLYAIESENKDANLFNCVQRGHQNCLEVMPVFFLFLILGGLQHPIASSIFGVVYSVGRFFYFTGYS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain