SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene83394

Length: 801 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene83394

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Multicopper oxidase, putative n=1 Tax=Ricinus communis RepID=B9SR02_RICCO	-	-	66%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	80%
Blast2go	l-ascorbate oxidase homolog	-	-	81%

Source	GOs	Term	Type	e value	Identity
Blast2go	plant-type cell wall	GO:0009505	Cellular Component	0.0	81%
Blast2go	apoplast	GO:0048046	Cellular Component	0.0	81%

Source	InterPros	Term	Type	Identity
Sma3	Multicopper oxidase, type 1	IPR001117	-	-
Sma3	Aminoacyl-tRNA synthetase, class I, conserved site	IPR001412	-	-
Sma3	Lipocalin	IPR002345	-	-
Sma3	Cupredoxin	IPR008972	-	-
Sma3	Multicopper oxidase, type 2	IPR011706	-	-
Sma3	Multicopper oxidase, type 3	IPR011707	-	-
Sma3		IPR013753	-	-
Sma3	Beta tubulin, autoregulation binding site	IPR013838	-	-

Full-Lengther Next Prediction

SNPs (tot: 66)

Position	A %	C %	G %	T %	Probability
63		25	75		0.996477
64		75	25		0.996477
67	25			75	0.996477
69		25		75	0.996481
70			75	25	0.996481
74	66	33			0.997452
75	66			33	0.997452
76			33	66	0.997452
77	66			33	0.997452
79	33	66			0.997452
80		33	66		0.997452
82	66	33			0.997452
83	33	66			0.997452
109	80	20			0.995505
110	80		20		0.995505
112		20	80		0.995505
113	75		25		0.996473
114	75			25	0.996473
115	75		25		0.996473
121	75			25	0.996473
122			25	75	0.996473
123		75	25		0.996473
125	66	16		16	0.988857
129	83		16		0.994516
130		16		83	0.994523
131			80	20	0.995493
132	16	16	66		0.988857
133	20	80			0.995493
135		16		83	0.99452
140	83	16			0.994523
144	83			16	0.994523
145		20		80	0.995493
147		16		83	0.994523
150	20	80			0.995493
230		10	90		0.903101
235	66		33		1.0
236		66		33	1.0
237	70	10	20		0.999998
240		88		11	0.923564
241		80		20	0.999996
242	77			22	0.999999
246		20	80		0.999996
248	80		20		0.999996
311		12	87		0.992556
315	87			12	0.992556
319	87	12			0.992558
321	87			12	0.992556
326		85	14		0.993533
327	85			14	0.993533
329	12		87		0.992554
330		88		11	0.923695
333	87		12		0.992554
334	88			11	0.923695
335			12	87	0.992556
337		12		87	0.992556
345	85			14	0.993533
350	85	14			0.993533
351	85			14	0.993533
436	87	12			0.992556
438	87			12	0.992556
441		87		12	0.992556
442		87	12		0.992556
446		87		12	0.992558
447	85			14	0.993533
448		85	14		0.993533
750	66		33		0.997453

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain