SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene82622

Length: 497 nt

Origin of reads: Biogeco1 v2 Uagpf v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene82622 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Low temprature induced-like protein n=1 Tax=Picea sitchensis RepID=A9NQK4_PICSI	-	-	3.0e-14	89%
FL-Next	tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	89%
Blast2go	low temprature induced-like protein	-	-	1.1304e-18	90%

Source	InterPros	Term	Type	e value	Identity
Sma3	Proteolipid membrane potential modulator	IPR000612	-	0.0	-
Sma3	Extracellular solute-binding protein, family 3, conserved site	IPR018313	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
420	83		16		0.994512
421	14		85		0.993533
454	16	83			0.994512
455	14	85			0.993541
456		83		16	0.994512
457		83	16		0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain