SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene82517

Length: 779 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene82517

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Multicopper oxidase, putative n=1 Tax=Ricinus communis RepID=B9SR02_RICCO	-	-	9.94922e-44	69%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	67%
Blast2go	l-ascorbate oxidase homolog	-	-	0.0	79%

Source	GOs	Term	Type	e value	Identity
Blast2go	plant-type cell wall	GO:0009505	Cellular Component	0.0	79%
Blast2go	apoplast	GO:0048046	Cellular Component	0.0	79%

Source	InterPros	Term	Type	Identity
Sma3	Multicopper oxidase, type 1	IPR001117	-	-
Sma3	Aminoacyl-tRNA synthetase, class I, conserved site	IPR001412	-	-
Sma3	Lipocalin	IPR002345	-	-
Sma3	Cupredoxin	IPR008972	-	-
Sma3	Multicopper oxidase, type 2	IPR011706	-	-
Sma3	Multicopper oxidase, type 3	IPR011707	-	-
Sma3		IPR013753	-	-
Sma3	Beta tubulin, autoregulation binding site	IPR013838	-	-

Full-Lengther Next Prediction

SNPs (tot: 49)

Position	A %	C %	G %	T %	Probability
54			20	80	0.995498
55			50	50	1.0
56		25	25	50	0.995533
60	60		40		1.0
61	75			25	0.996473
62	60	40			1.0
63	20	20		60	0.992578
64		25	50	25	0.995533
66		25	75		0.996473
67	25		75		0.996473
68	75	25			0.996473
69	75			25	0.996473
70			25	75	0.996473
71	75			25	0.996473
73	25	75			0.996473
74		25	75		0.996473
76	75	25			0.996473
77	25	75			0.996473
124	60	40			1.0
125		10	90		0.90298
128	60		40		1.0
131	40		60		1.0
133	50		7		1.0
134		42		57	1.0
140	50	50			1.0
144		38	61		1.0
150	7	14		64	0.999978
152	14	85			0.999981
265		12	87		0.999964
344		72		27	1.0
429	12		87		0.992556
430		12	87		0.992556
431		12	87		0.992556
432	87			12	0.992555
433	85			14	0.993533
438	77	11		11	0.968167
439		11	88		0.923564
440	88			11	0.923834
441		25	75		1.0
442			88	11	0.923564
443		88		11	0.923834
444	11	77	11		0.968167
445	11		77	11	0.968167
448		88		11	0.924009
449	87			12	0.992554
450		87	12		0.992554
456	11	88			0.924009
465	87	12			0.992554
638		66		33	0.997467

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain