SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene81666

Length: 969 nt

Origin of reads: Biogeco1 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene81666

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	aquaporin PIP 2 [Physcomitrella patens]	-	-	84%
FL-Next	tr=PaMip-2; Picea abies (Norway spruce) (Picea excelsa).	-	-	97%
Blast2go	aquaporin	-	-	89%

Source	InterPros	Term	Type	Identity
Sma3	Major intrinsic protein	IPR000425	-	-
Sma3	Aquaporin	IPR012269	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-
Sma3	Glycoside hydrolase, family 5, conserved site	IPR018087	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: O49921

Fln msg: Warning!, your query overlaps and the subject is separated, your sequence is shorter than subject: 168 - 309

Fln protein: YCTAGISGGHINPAVTFGLFLARKVSLPRAVLYMIAQCLxxICGTGLVKAFQKSFYDRYGGGANFVHPGYTKGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYGHKxxxxxFRSNPHV*LGDSCCR*

Protein Length: 169

Fln nts: TTTACTGCACCGCTGGTATTTCAGGAGGGCATATCAATCCTGCTGTCACTTTTGGACTGTTTTTAGCTAGGAAGGTTTCCTTGCCAAGAGCTGTTCTGTATATGATAGCACAGTGTTTGxxxxxxATTTGTGGAACTGGATTGGTGAAGGCCTTCCAAAAGAGTTTCTATGATAGATATGGGGGTGGAGCTAACTTTGTGCATCCCGGATACACCAAGGGTGTGGGTTTGGCTGCTGAAATCATCGGCACCTTTGTGCTGGTTTACACTGTTTTCTCTGCAACCGACCCCAAGCGCAGTGCTCGAGACTCCCATGTTCCTGTCTTGGCTCCATTGCCTATTGGTTTTGCTGTTTTCATGGTACATTTGGCCACCATTCCCATCACTGGGACAGGCATCAACCCTGCAAGGAGCTTCGGAGCAGCAGTGATTTATGGCCACAAACAxxxxxxxxxxxxGTTCCGAAGCAACCCCCATGTGTAATTAGGAGACAGTTGCTGCAGGTAGGAGTTGTCGTGTCTCAAGTCTGTAGGTATGCAATAAAAGAATTGTTTGTGGAAGATAGCTCCTTCTCTCAGACCCTTGATTTGGGGGAAGTATTACTGAGTACAAAGGGCAGAGAGGGTGATGGTTTGTTCGTTTGGATTGAATCCAGTGTTGCTGCAGCAGCAGTAAGAATGGTTGTAATTTATGTAGACATTATGCATGGTTGTACTCAGAAGTAGTACCTCCTCTCCATGGAATTGTTCATAATTTCTTCTTCCTCTGCTCTGTTTGTTAATCAGAGGACTTAGTACACTGGTTTGTAAGTATAGTGTTTGTGTGTCCTCTTCTTCTGTAAACATGATTTTGTGGGCAGTTGCATATAACACCCATTTGGAATTGAAAGTTTTCTTCTCCAGCTTTTGCAAGTTATGACCATCTCAAATCATAGTGTGGTCCATGGACTACTTTTCAAGATAGTAATACTTA

Fln Alignment:

AllPineV4_rep_c137752___YCTAGISGGHINPAVTFGLFLARKVSLPRAVLYMIAQCLGxxxxxxxAICGTGLVKAFQKSFYDRYGGGANFVHPGYTKGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYGHKQSWDxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLGSFRSNPHV*LGDSCCR*ELSCLKSVGMQ
O49921_______________YCTAGISGGHINPAVTFGLFLARKVSLPRAILYMIAQCLGxxxxxxxAICGTGLVKSFQKSFYDRYGGGANYVHHGYTKGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYGHKQSWDxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLGSFRSNGNVELEELVARRSCLCLKYVGLQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain