SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene79080

Length: 642 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene79080

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Arogenate/prephenate dehydratase n=1 Tax=Populus trichocarpa RepID=B9H107_POPTR	-	-	6.0e-18	47%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	72%
Blast2go	arogenate prephenate dehydratase	-	-	0.0	66%

Source	ECs	Term	Type	e value	Identity
Blast2go	Arogenate dehydratase.	EC:4.2.1.91	-	0.0	66%

Source	KEGGs	Term	Identity
Blast2go	Phenylalanine, tyrosine and tryptophan biosynthesis	00400	66%
Blast2go	Biosynthesis of phenylpropanoids	01061	66%
Blast2go	Biosynthesis of alkaloids derived from shikimate pathway	01063	66%
Blast2go	Biosynthesis of plant hormones	01070	66%
Blast2go	Metabolic pathways	01100	66%
Blast2go	Biosynthesis of secondary metabolites	01110	66%

Source	GOs	Term	Type	e value	Identity
Blast2go	arogenate dehydratase activity	GO:0047769	Molecular Function	0.0	66%
Blast2go	chloroplast	GO:0009507	Cellular Component	0.0	66%

Source	InterPros	Term	Type	Identity
Sma3	Prephenate dehydratase	IPR001086	-	-
Sma3	Amino acid-binding ACT	IPR002912	-	-
Sma3	Prephenate dehydratase, conserved site	IPR018528	-	-

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
279			66	33	0.997461

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain