SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene78614

Length: 907 nt

Origin of reads: Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene78614

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DNAJ heat shock N-terminal domain-containing protein-like [Oryza sativa Japonica Group] gb\|EEC74039.1\| hypothetical protein OsI_09017 [Oryza sativa Indica Group]	-	-	1.0e-06	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Blast2go	chaperone protein dnaj	-	-	5.5881e-18	80%

Source	InterPros	Term	Type	Identity
Sma3	Heat shock protein DnaJ, N-terminal	IPR001623	-	-
Sma3	Heat shock protein DnaJ	IPR003095	-	-
Sma3		IPR015609	-	-
Sma3	Heat shock protein DnaJ, conserved site	IPR018253	-	-

Full-Lengther Next Prediction

SNPs (tot: 69)

Position	A %	C %	G %	T %	Probability
186		16		83	0.994517
188			83	16	0.994517
189	83	16			0.994517
190	83		16		0.994517
191	83			16	0.994517
192		83	16		0.994517
194	83	16			0.994517
195		16	83		0.994517
197	80			20	0.995493
199	80		20		0.995493
201		14		85	0.993535
204	71	14			0.984337
205	14	14		71	0.984356
206	71	14	14		0.984356
208	66	16	16		0.98884
210		16		66	0.988816
211		16		83	0.994523
214			16	83	0.994515
215			16	83	0.994515
216		20	80		0.995493
219		80		20	0.995493
220	80	20			0.995493
223	80	20			0.995493
225	80	20			0.995493
226	20		80		0.995493
280		28		71	1.0
286	71		28		1.0
288	71	28			1.0
289	71	28			1.0
290			71	28	1.0
292	75		25		1.0
295		14		85	0.993533
298		14	14		0.984337
299	14			85	0.993533
300		25	75		1.0
301	14			85	0.993533
303	14	14	71		0.984337
437	75	25			0.996478
439		75		25	0.996477
440	75	25			0.996477
444			25	75	0.996477
447		25		75	0.996477
449	66			33	0.997452
450		66	33		0.997452
451	75		25		0.99649
452	75	25			0.99649
453	75			25	0.99649
454	75		25		0.99649
458		33	66		0.997452
459			66	33	0.997452
484			66	33	0.997467
485		33	66		0.997467
486	66		33		0.997461
488			33	66	0.997476
490		33		66	0.997476
491		33		66	0.997476
498		33	66		0.997476
518	75			25	0.996476
520		75		25	0.996476
526	75	25			0.996476
527		25	75		0.996476
534		33		66	0.997452
536		66	33		0.997452
537	66			33	0.997452
538		33	66		0.997452
540		33	66		0.997452
541	66			33	0.997452
542		33	66		0.997452
652		20	80		0.995493

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain