SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene74695

Length: 296 nt

Origin of reads: Inia v1

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene74695 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Cyclic nucleotide-gated ion channel, putative n=1 Tax=Ricinus communis RepID=B9SIE1_RICCO	-	-	3.0e-08	90%
FL-Next	sp=Cyclic nucleotide-gated ion channel 4; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	90%

Source	InterPros	Term	Type	Identity
Sma3	Cyclic nucleotide-binding domain	IPR000595	-	-
Sma3	Ion transport	IPR005821	-	-
Sma3	RmlC-like jelly roll fold	IPR014710	-	-

Full-Lengther Next Prediction

SSRs (tot: 1)

Start position	End position	Sequence	Length
283	295	AT AT AT AT AT AT A	13

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain