SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
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GOs
ECs
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene67869

Length: 261 nt

UniGene Fasta

>sp_v2.0_unigene67869
ATGGGAGAAGTTGAGGATCGGGGGGATCCTTTAGAAACTGCACAGGTTATAGAAGACACAGTCAAACGAGAGCTGGAAAGATGTCTTGAGGAAGCCGAGTACTATGACAACACCAGAACACAATTGGATTTGGCACTTGTGATTGATGGGAATGTTTAATGTATGCATTAGATCCTCAGTTACGAGGGAAACTGCTAAGGCTAAGCATGATGTCCAAAGCTGTTGTTTGTTGTCGAGTATCTCCTTTGCAGAAAGCACAGG

Ace file of the UniGene sp_v2.0_unigene67869

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Aminophospholipid ATPase (Fragment) n=2 Tax=Malpighiales RepID=B9HU80_POPTR	-	-	2.0e-17	72%
FL-Next	sp=Phospholipid-transporting ATPase 3; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	52%
Blast2go	aminophospholipid atpase	-	-	9.03827e-18	81%

Source	GOs	Term	Type	e value	Identity
Blast2go	root development	GO:0048364	Biological Process	9.03827e-18	81%
Blast2go	Golgi vesicle budding	GO:0048194	Biological Process	9.03827e-18	81%
Blast2go	phospholipid transport	GO:0015914	Biological Process	9.03827e-18	81%
Blast2go	shoot development	GO:0048367	Biological Process	9.03827e-18	81%
Blast2go	phospholipid transporter activity	GO:0005548	Molecular Function	9.03827e-18	81%
Blast2go	hydrolase activity	GO:0016787	Molecular Function	9.03827e-18	81%
Blast2go	Golgi apparatus	GO:0005794	Cellular Component	9.03827e-18	81%
Blast2go	plasma membrane	GO:0005886	Cellular Component	9.03827e-18	81%

Source	InterPros	Term	Type	Identity
Sma3	ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter	IPR001757	-	-
Sma3	ATPase, P-type, phospholipid-translocating, flippase	IPR006539	-	-
Sma3	ATPase, P-type, ATPase-associated domain	IPR008250	-	-
Sma3	ATPase, P-type phosphorylation site	IPR018303	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9XIE6

Fln msg: ERROR#3, very serious frame error, Overlapping hits, possible frame ERROR between 150 and 150, Distance to subject end: 386 aas, your sequence is shorter than subject: 87 - 1213

Fln protein: MGEVEDRGDPLETAQVIEDTVKRELERCLEEAEYYDNTRTQLDLALVIDxxCLMYALDPQLRGKLLRLSMMSKAVVCCRVSPLQKAQ

Protein Length: 88

Fln nts: ATGGGAGAAGTTGAGGATCGGGGGGATCCTTTAGAAACTGCACAGGTTATAGAAGACACAGTCAAACGAGAGCTGGAAAGATGTCTTGAGGAAGCCGAGTACTATGACAACACCAGAACACAATTGGATTTGGCACTTGTGATTGATxxxxxxTGTTTAATGTATGCATTAGATCCTCAGTTACGAGGGAAACTGCTAAGGCTAAGCATGATGTCCAAAGCTGTTGTTTGTTGTCGAGTATCTCCTTTGCAGAAAGCACAGG

Fln Alignment:

AllPineV4_rep_c93364___EVEDRGDPLETAQVIEDTVKRELERCLEEAEYYDNTRTQLDLALVIDGECLMYALDPQLRGKLLRLSMMSKAVVCCRVSPLQKAQ
Q9XIE6_______________EAEERGDQVEIARVIKEEVKRELKKSLEEAQHSLHTVAGPKLSLVIDGKCLMYALDPSLRVMLLSLSLNCTSVVCCRVSPLQKAQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain