SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene65389

Length: 760 nt

Origin of reads: Biogeco1 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene65389

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	peptidylprolyl cis-trans isomerase [Oryza sativa Indica Group]	-	-	88%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	91%
Blast2go	peptidylprolyl cis-trans isomerase	-	-	90%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein binding	GO:0005515	Molecular Function	0.0	90%

Source	InterPros	Term	Type	Identity
Sma3	Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain	IPR001179	-	-
Sma3	Tetratricopeptide TPR-1	IPR001440	-	-
Sma3	Tetratricopeptide-like helical	IPR011990	-	-
Sma3	Tetratricopeptide repeat-containing domain	IPR013026	-	-
Sma3	Tetratricopeptide repeat	IPR019734	-	-

Full-Lengther Next Prediction

SNPs (tot: 12)

Position	A %	C %	G %	T %	Probability
586	66	33			0.997452
587	66		33		0.997452
590	66		33		0.997452
595		33		66	0.997452
601	66	33			0.997452
602	66			33	0.997452
606	33		66		0.997452
610		33	66		0.997452
611	33	66			0.997452
663		33	66		0.997456
664	33		66		0.997459
666	66			33	0.997458

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain