SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene63819

Length: 476 nt

Origin of reads: Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene63819

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	arabinogalactan protein 20 [Arabidopsis thaliana] sp\|Q9M373.1\|AGP20_ARATH RecName: Full=Arabinogalactan peptide 20; Short=AG-peptide 20; Flags: Precursor emb\|CAB71094.1\| putative protein [Arabidopsis thaliana] gb\|AAM61203.1\| unknown [Arabidopsis thaliana]	-	-	2.0e-06	86%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	82%
Blast2go	agp16 precursor	-	-	6.34608e-21	85%

Source	InterPros	Term	Type	e value	Identity
Sma3	Arabinogalactan peptide, AGP	IPR009424	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
51		83		16	0.994512
52			16	83	0.994512
54		16		83	0.994512
57			83	16	0.994512
60		16	83		0.994512
62		16	83		0.994512
97	85			14	0.993537

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain