SustainPineDB

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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene63269

Length: 449 nt

Origin of reads: Biogeco1 v2 Uagpf v2

UniGene Fasta

>sp_v2.0_unigene63269
CGTCGTGACCTTGGCTGTCACTCAAAAAATAACTTCAAATTGCATTAAACACGTAGTTTCAAGCACAATGGTGACGTTCTTGGCTTATCAATATCTATAAGTGCAGTGTGGGCAGAGTGGGGAGTGTGCAAAGCAGATCCACTTCCGGAAAATCCACTTGCCTATTCTTTCAGTCTTTCAGGTTGTTTCCCAAGAAATGTTAGAATTTATGCAAGAATTACGTAAGGTTGTAGCAGTGGGAGTTGTAGGTGGCTCAGATCTTGCAAAAATAACTGAGCAGCTTGGAAAAACTGTTATCTCCGACTATGATTATGTATTTTCAGAGAATGGCCTTGTTGCTCACAAAGGTAGCAAAATGATTGGTAATCAGAGCTTTAAAGCATTCCTTGGAGATGAAAAGCTGAAGGAGTTCATCAATTTTACACTTCATTACATTGCTGACTTGGATA

Ace file of the UniGene sp_v2.0_unigene63269

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Phosphomannomutase n=3 Tax=Glycine max RepID=PMM_SOYBN	-	-	3.0e-34	81%
FL-Next	sp=Phosphomannomutase; Glycine max (Soybean) (Glycine hispida).	-	-	0.0	81%
Blast2go	phosphomannomutase d1	-	-	4.4281e-43	89%

Source	InterPros	Term	Type	e value	Identity
Sma3	Eukaryotic phosphomannomutase	IPR005002	-	0.0	-
Sma3	HAD-superfamily hydrolase, subfamily IIB	IPR006379	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: sp_plants

Fln subject: Q1W376

Fln msg: Distance to subject end: 135 aas, your sequence is shorter than subject: 84 - 247

Fln protein: MLEFMQELRKVVAVGVVGGSDLAKITEQLGKTVISDYDYVFSENGLVAHKGSKMIGNQSFKAFLGDEKLKEFINFTLHYIADLD

Protein Length: 85

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAAAAATAACTTCAAATTGCATTAAACACGTAGTTTCAAGCACAATGGTGACGTTCTTGGCTTATCAATATCTATAAGTGCAGTGTGGGCAGAGTGGGGAGTGTGCAAAGCAGATCCACTTCCGGAAAATCCACTTGCCTATTCTTTCAGTCTTTCAGGTTGTTTCCCAAGAA_-_ATGTTAGAATTTATGCAAGAATTACGTAAGGTTGTAGCAGTGGGAGTTGTAGGTGGCTCAGATCTTGCAAAAATAACTGAGCAGCTTGGAAAAACTGTTATCTCCGACTATGATTATGTATTTTCAGAGAATGGCCTTGTTGCTCACAAAGGTAGCAAAATGATTGGTAATCAGAGCTTTAAAGCATTCCTTGGAGATGAAAAGCTGAAGGAGTTCATCAATTTTACACTTCATTACATTGCTGACTTGGATA

Fln Alignment:

AllPineV4_rep_c77642___QVVSQEMLEFMQELRKVVAVGVVGGSDLAKITEQLGKTVISDYDYVFSENGLVAHKGSKMIGNQSFKAFLGDEKLKEFINFTLHYIADLD
Q1W376_______________KVVTPEMLTFMQELRKVVTVGVVGGSDLIKISEQLGSTVTNDYDYVFSENGLVAHKEGKLIGTQSLKSFLGEEKLKEFINFTLHYIADLD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain