SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene61710

Length: 988 nt

Origin of reads: Biogeco3 v1

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene61710

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Putative phosphate transporter n=1 Tax=Cryptomeria japonica RepID=Q1XG57_CRYJA	-	-	62%
FL-Next	tr=Putative phosphate transporter; Cryptomeria japonica (Japanese cedar) (Cupressus japonica).	-	-	74%
Blast2go	inorganic phosphate	-	-	80%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase, cysteine peptidase active site	IPR000169	-	-
Sma3	WW/Rsp5/WWP	IPR001202	-	-
Sma3	Hydroxymethylglutaryl-CoA reductase, class I/II	IPR002202	-	-
Sma3	Phosphate permease	IPR004738	-	-
Sma3	General substrate transporter	IPR005828	-	-
Sma3	Sugar transporter, conserved site	IPR005829	-	-
Sma3	Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase	IPR006186	-	-
Sma3	Major facilitator superfamily	IPR011701	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: Q1XG57

Fln msg: your sequence is shorter than subject: 288 - 544

Fln protein: KRAAADMSKVLDVEIEVSPRNVQEFRRNQTKFGLFSKEFARRHGWHLLGTTSTWFLFDIAFYSQNLFQKDIFTAVGWLHSAKRMNAIEEVYRIARAQAIIALCSTVPGYWFTVALVDHIGRKTIQVMGFFFMTVFMFALAIPYYHWRGTKCDNGFCGGNHTAFLVLYALTFFFSNFGPNATTFIVSAEIFPARIRSTCHGISAAAGKAGAIIGALGFLYAAQSTHISEVDKGYNKGIGIKNSLIFLGVTNALGLLCSFLIPETNGKSLEELSRENAEEEGVELEHTR*

Protein Length: 289

Fln nts: AAAAAGGGCCGCGGCCGACATGTCGAAGGTTCTTGACGTAGAAATCGAGGTAAGTCCACGGAATGTGCAAGAGTTTCGAAGGAATCAGACGAAGTTCGGCTTATTTTCCAAAGAGTTCGCAAGGCGGCACGGCTGGCATCTACTTGGAACTACAAGCACATGGTTTCTGTTCGACATCGCGTTCTACAGCCAAAATCTATTCCAGAAGGACATCTTCACGGCCGTGGGATGGCTTCACTCTGCCAAAAGAATGAACGCCATTGAAGAAGTGTATCGAATAGCAAGAGCGCAGGCGATAATTGCACTGTGCTCGACAGTCCCAGGCTACTGGTTCACGGTCGCCTTGGTCGACCACATAGGAAGAAAAACAATTCAGGTAATGGGATTCTTCTTCATGACTGTCTTCATGTTCGCGCTTGCTATTCCATACTACCACTGGCGAGGAACTAAATGTGACAACGGCTTCTGCGGCGGCAACCACACAGCCTTTCTGGTACTCTACGCCTTGACCTTCTTTTTTTCAAACTTTGGTCCAAACGCCACCACTTTCATTGTGtcGGCGGAAATCTTCCCGGCAAGAATTCGTTCAACATGCCACGGCATATCGGCTGCAGCAGGTAAAGCAGGAGCCATAATCGGAGCCTTGGGTTTTCTCTACGCGGCTCAGAGCACTCATATATCTGAAGTCGACAAAGGCTACAACAAGGGTATTGGCATTAAGAATTCTCTGATATTCTTAGGAGTAACAAATGCTCTGGGTTTGCTTTGCTCATTTCTGATCCCTGAAACAAACGGAAAATCATTGGAGGAGCTCTCCCGTGAGAACGcGGAAGAGGAAGGAGTTGAACTGGAGCACACCCGTTGA___GCGCGCAGAACGGCAgCAACTGAATAGCTGGAAAACCTCAATGTTGTGAAACAAAGCTGTGTAAATTTGTTTACGTAATAAGCTAATGATCTAGTCCTCAGCACCACTATAAGTTACAACATT

Fln Alignment:

AllPineV4_rep_c71233___KRAAADMSKVLDVEIEVSPRNVQEFRRNQTKFGLFSKEFARRHGWHLLGTTSTWFLFDIAFYSQNLFQKDIFTAVGWLHSAKRMNAIEEVYRIARAQAIIALCSTVPGYWFTVALVDHIGRKTIQXXXXXXXXXXXXALAIPYYHWRGTKCDNGFCGGNHTAFLVLYALTFFFSNFGPNATTFIVSAEIFPARIRSTCHXXXXXXXXXXXXXXXXXXXXXXQSTHISEVDKGYNKGIGIKNSLIFLGVTNALGLLCSFLIPETNGKXXXXXXXXXXXXXGVEL
Q1XG57_______________KQAAADMSRVMQVDIEEDRQKIDEIATREPSFGLFSAQFAKRHGLHLLGTTSTWLLLDVAYYSQNLFQKDIFTAIGWIPAGKKMNAIEEVYRIAKAQTLIALCSTVPGYWFTVFFIDRIGRFTIQLMGFFFMTVFMFALAIPYNHWRGTKCGDDYCDGNHIAFVVLYSFTFFFANFGPNATTFIVPAEVFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSTHQSEVDHGYHKGIGVKNSLILLGVTNAMGFLFTFLVPETNGKSLEELSGENEEDEGTEL

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
645	33			33	0.997753

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain