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Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: C0PTA1

Fln msg: Distance to subject end: 530 aas, atg_distance in limit (1-15): atg_distance = 5, Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 383 - 946

Fln protein: MEVEMTGVNKVMKAVLAMLVLEVTIWSSEAMLDPLDFLALQSIRKSMDDMPGSNFFKSWDFSSDPCSFNGVLCESQGGPDRVVTLNLGDASAGVPGLTGKLRRDLGCHSSLVELTIVPGLVAGSIPETLGQCKELQFVGISKNLLSGTIPPCFGALQKLQTLDLSFNHLVGEIPRDVGQLPVLSNLILCHNKFIGSIPTFISGLVRLDLKHNYLSGSLPSLPNSLQYLSLSSNKLNGNIEKLSSLQKLNYLDLSFNQFRGSIPSILFTFPLMSLQMQRNSFSGPIVPQVQVNIPTVDLSYNLLTGQVSPKLAYVQSLYLNDNLFTGAVPEEFTNRLVSADIQVLYLQLNYLTNITLKPSTMLPVTSSLCIHYNCMLLPIQPPF

Protein Length: 384

Fln nts: CGTCGTGACCTTGGCTGTCACTTTTGAGTTTGGCCAAATTGAGAAATCGAGGTGTGTAAGTTTTAGCT_-_ATGGAAGTGGAGATGACAGGGGTGAATAAGGTGATGAAAGCAGTGTTAGCAATGCTTGTTCTGGAAGTGACAATATGGTCGTCGGAGGCAATGCTAGACCCACTTGATTTTCTAGCTCTGCAATCCATCAGGAAAAGCATGGATGACATGCCAGGCTCCAACTTCTTCAAGTCATGGGATTTTTCCTCTGACCCTTGCAGTTTCAATGGAGTTTTGTGTGAATCACAAGGTGGACCAGACCGAGTCGTGACACTCAATCTGGGCGATGCATCTGCAGGTGTCCCAGGGCTCACAGGCAAGCTGCGTCGTGACCTTGGCTGTCACTCGTCCCTGGTAGAGCTCACAATAGTCCCAGGTTTGGTGGCAGGTTCGATACCAGAAACTCTGGGGCAATGCAAGGAGCTCCAGTTTGTGGGTATAAGCAAAAACTTACTATCGGGTACTATTCCTCCCTGCTTCGGTGCTTTGCAGAAGTTGCAGACATTGGACTTGAGCTTTAATCATCTGGTGGGTGAGATTCCTCGGGATGTTGGGCAGCTTCCCGTTTTGTCAAATCTCATTCTCTGTCACAACAAGTTCATAGGTTCAATCCCCACCTTCATATCCGGTCTGGTTCGGCTGGACCTTAAGCACAATTACCTCTCAGGAAGCCTGCCTTCTCTACCTAATTCACTCCAGTATCTTTCCCTCTCCAGCAATAAGCTCAATGGCAACATTGAAAAGCTATCCAGCTTACAAAAGTTGAATTATCTTGATCTGAGTTTCAATCAGTTCAGAGGCAGCATCCCTTCCATCTTGTTCACTTTCCCTCTCATGTCTCTTCAAATGCAAAGAAACTCTTTTTCTGGACCCATTGTTCCCCAAGTTCAAGTCAATATCCCAACGGTGGACCTCAGCTATAATCTTCTCACAGGCCAGGTCTCCCCAAAGCTGGCCTACGTCCAGAGTCTGTACCTCAACGATAACCTTTTTACAGGGGCAGTTCCTGAAGAATTCACCAACAGGCTTGTCTCGGCGGATATTCAAGTCCTGTACCTTCAACTAAACTATCTTACTAACATTACTCTCAAGCCCTCCACCATGCTGCCTGTGACAAGCTCTCTGTGCATTCATTACAACTGCATGCTGCTTCCCATTCAACCCCCATTCGC

Fln Alignment:

AllPineV4_rep_c70709___EAMLDPLDFLALQSIRKSMDDMPGSNFFKSWDF--SSDPCSFNGVLCESQGGPDRVVTLNLGDASAGVPGLTGKLRRDLGCHSSLVELTIVPGLVAGSIPETLGQCKELQFVGISKNLLSGTIPPCFGALQKLQTLDLSFN-------------------------HLVGEIPRDVGQLPVLSNLILCHNKFI-GSIPTFI---SGLVRLDLKHNY---XXXXXXXXXXXXQYLSLSSNKLNGNI-EKLSSLQKLNYLDLSFNQFRGSIPSIL-FTFPLMSLQMQRNSFSGPIVPQVQVN---IPTVDLSYNLLTGQVSPKLAYVQSLY---LNDNLFTGAVPEEFTNRLVSADIQVLYLQLNYLTNI
C0PTA1_______________EARVHERDLNALLAFKKAITYDP-SRSLSNWTAQNSHNICSWYGVRCRPHSR--RVVQIEL--SSSGLEGI---------------------------LSSSLGSLSFLKTLDLSANNLTGGIPPEFGRLKALRTLDLTFNEMLGGSVPKSLLNCTHLKWIGLANINLTGTIPTEFGRLVELEHLDLSSNYYLSGSIPTSLGNCTSLSHLDLSNNSLSGHIPPTLGNCISLSHLHLSENSLSGHIPPTLGNCTSLSHLDLSGNSLSGHIPPTLGKCISLSYIYLSGNSLSGH-MPRTLGNLTQISHINLSFNNLSGVIPVDLGSLQKLEWLGLSDNNLSGAIPVDLGS---LQKLQILDLSDNALDNI