SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene60033

Length: 668 nt

Origin of reads: Biogeco1 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene60033

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	cytochrome P450 [Pyrus communis]	-	-	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	74%
Blast2go	cytochrome p450 monooxygenase cyp736b	-	-	75%

Source	InterPros	Term	Type	Identity
Sma3	Protease inhibitor I4, serpin	IPR000215	-	-
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Integrase, catalytic core	IPR001584	-	-
Sma3	Zinc finger, CCHC-type	IPR001878	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Reverse transcriptase, RNA-dependent DNA polymerase	IPR013103	-	-
Sma3	Lipoxygenase, C-terminal	IPR013819	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Full-Lengther Next Prediction

SNPs (tot: 36)

Position	A %	C %	G %	T %	Probability
126	80	20			0.995495
127			50	50	1.0
128			80	20	0.995495
130			20	80	0.995497
132			20	80	0.995497
134		20		80	0.995495
136		80		20	0.995495
138		75	25		0.996473
139		75	25		0.996473
140		50	50		1.0
142		25		75	0.996475
143		25	75		0.996476
144		75		25	0.99649
146	25	75			0.99649
149		33		66	0.997452
161		75		25	0.996473
166		75	25		0.996473
183		50	50		1.0
205		50	50		1.0
221		50	50		1.0
251		66		33	0.997453
252	66		33		0.997452
254			66	33	0.997452
280	75		25		0.996473
330		75	25		0.996473
368		50	50		1.0
377	40		60		1.0
554		66		33	1.0
567		66		33	1.0
597	33		66		1.0
608		60		40	1.0
612	40	60			1.0
637	40		60		1.0
643			40	60	1.0
659	50	50			1.0
670	33			33	0.997752

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain