SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene59329

Length: 405 nt

UniGene Fasta

>sp_v2.0_unigene59329
AATGTGCTTTATTGCATTGAGCGAGAAACACCCAGAGAGTTATTCGGACAAGTATCTCCGAGATATTATTCTGAATTTCATGATAGCTGGCAGGGACACAACTGCAGTTACCCTATGTTGGTTTTTTCATTTGCTTTGCAATAATCCAGGTGTTGAAGGAAAGATTCTTCATGAAATTCTTGACCTGGTCAAGGAGAATGAATGTATGTCAATTGAAGAATCTGTAAGTATGTTTTCTCAAAGTCTGACGCACACAGTATTGGATAACATGCACTATCTTCAAGCAGCTTTATCAGAAGCCTTGCGCTTACACCCAGCTGTTCCTGCGGATGCAAAGTATGTAGTTTCTGATGACATCCTTCCTGATGGATTCAAAATCAAGAAAGGTGATCTGATCAGCTATGT

Ace file of the UniGene sp_v2.0_unigene59329

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	RecName: Full=Cytochrome P450 704C1; AltName: Full=Cytochrome P450 CYPD gb\|AAX07434.1\| cytochrome P450 CYPD [Pinus taeda]	-	-	6.0e-33	51%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	51%
Blast2go	cytochrome p450	-	-	1.28985e-40	69%

Source	GOs	Term	Type	e value	Identity
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	1.28985e-40	69%

Source	InterPros	Term	Type	Identity
Sma3	ATPase, F1 complex, OSCP/delta subunit	IPR000711	-	-
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Legume lectin domain	IPR001220	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: C0PT68

Fln msg: Distance to subject end: 103 aas, your sequence is shorter than subject: 134 - 543

Fln protein: MCFIALSEKHPESYSDKYLRDIILNFMIAGRDTTAVTLCWFFHLLCNNPGVEGKILHEILDLVKENECMSIEESVSMFSQSLTHTVLDNMHYLQAALSEALRLHPAVPADAKYVVSDDILPDGFKIKKGDLISY

Protein Length: 135

Fln nts: AATGTGCTTTATTGCATTGAGCGAGAAACACCCAGAGAGTTATTCGGACAAGTATCTCCGAGATATTATTCTGAATTTCATGATAGCTGGCAGGGACACAACTGCAGTTACCCTATGTTGGTTTTTTCATTTGCTTTGCAATAATCCAGGTGTTGAAGGAAAGATTCTTCATGAAATTCTTGACCTGGTCAAGGAGAATGAATGTATGTCAATTGAAGAATCTGTAAGTATGTTTTCTCAAAGTCTGACGCACACAGTATTGGATAACATGCACTATCTTCAAGCAGCTTTATCAGAAGCCTTGCGCTTACACCCAGCTGTTCCTGCGGATGCAAAGTATGTAGTTTCTGATGACATCCTTCCTGATGGATTCAAAATCAAGAAAGGTGATCTGATCAGCTATGT

Fln Alignment:

AllPineV4_c60051___FIALSEKHPESYSDKYLRDIILNFMIAGRDTTAVTLCWFFHLLCNNPGVEGKILHEILDLVKENECMSI------EESVSMFSQSLTHTVLDNMHYLQAALSEALRLHPAVPADAKYVVSDDILPDGFKIKKGDLISY
C0PT68_______________FFFMAKENPELYTDKKLRDAILNFVIAGRDTTAVTLSWLFWLLAKNPSAEDKIVQELEEVERSHVGLSITDHNDGSDRLEKYSQLLTYDTLSKMHYLQAAITESLRLYPAVPLNGKTAVSDDILPDGNKVKRGNVINY

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain