SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene56022

Length: 337 nt

UniGene Fasta

>sp_v2.0_unigene56022
ATTTGGAAGTTGGATTGGAGCACCTTTCTCTAATTTGTACAAGACCTACAGTAAGGGTTTGCAGGTTTCTTTATTGGGGTCTCCTCTCAGATTTGATTCCCTTAGTGGGTACATCCCTACTTTTGTATCATCAATCAGTCAGCTTGGTGGTCAGGGAGGAGCAAGGTTATTGTTGCCTCCGGGTGTCAATGATACAGTTATTGCTATTTATGATGATGAGCCCACGAGCATCATAGCTTATGCCCTGACGTCTCATGAATATTATGCCCATGTGTCTGAGAAGACAGCTGATAAGAGTAAACAAAGAGAGAAAGACAGGGATAAAGAAAAGGAAACT

Ace file of the UniGene sp_v2.0_unigene56022

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative phosphoinositide kinase n=1 Tax=Oryza sativa Japonica Group RepID=Q94LF4_ORYSJ	-	-	1.0e-11	42%
FL-Next	tr=Os03g0399500 protein; Oryza sativa subsp. japonica (Rice).	-	-	0.0	47%
Blast2go	1-phosphatidylinositol-3-phosphate 5-kinase	-	-	6.96054e-15	65%

Source	ECs	Term	Type	e value	Identity
Blast2go		EC:2.7.1.15-	-	6.96054e-15	65%

Source	GOs	Term	Type	e value	Identity
Blast2go	endomembrane system organization	GO:0010256	Biological Process	6.96054e-15	65%
Blast2go	pollen development	GO:0009555	Biological Process	6.96054e-15	65%
Blast2go	vacuole organization	GO:0007033	Biological Process	6.96054e-15	65%
Blast2go	1-phosphatidylinositol-3-phosphate 5-kinase activity	GO:0000285	Molecular Function	6.96054e-15	65%
Blast2go	mitochondrion	GO:0005739	Cellular Component	6.96054e-15	65%
Blast2go	endosome	GO:0005768	Cellular Component	6.96054e-15	65%

Source	InterPros	Term	Type	Identity
Sma3	Zinc finger, FYVE-type	IPR000306	-	-
Sma3	Chaperonin Cpn60/TCP-1	IPR002423	-	-
Sma3	Phosphatidylinositol-4-phosphate 5-kinase, core	IPR002498	-	-
Sma3	Zinc finger, FYVE-related	IPR017455	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: Q0DRB6

Fln msg: Distance to subject end: 366 aas, your sequence is shorter than subject: 112 - 1665

Fln protein: FGSWIGAPFSNLYKTYSKGLQVSLLGSPLRFDSLSGYIPTFVSSISQLGGQGGARLLLPPGVNDTVIAIYDDEPTSIIAYALTSHEYYAHVSEKTADKSKQREKDRDKEKET

Protein Length: 113

Fln nts: ATTTGGAAGTTGGATTGGAGCACCTTTCTCTAATTTGTACAAGACCTACAGTAAGGGTTTGCAGGTTTCTTTATTGGGGTCTCCTCTCAGATTTGATTCCCTTAGTGGGTACATCCCTACTTTTGTATCATCAATCAGTCAGCTTGGTGGTCAGGGAGGAGCAAGGTTATTGTTGCCTCCGGGTGTCAATGATACAGTTATTGCTATTTATGATGATGAGCCCACGAGCATCATAGCTTATGCCCTGACGTCTCATGAATATTATGCCCATGTGTCTGAGAAGACAGCTGATAAGAGTAAACAAAGAGAGAAAGACAGGGATAAAGAAAAGGAAACT

Fln Alignment:

AllPineV4_c56090___SWIGAPFSNLYKTYSKGLQVSLLGSPLRFDSLSGYIPTFVSSISXXXXXXXXXXXXXXXVNDTVIAIYDDEPTSIIAYALTSHEYYAHVSEK
Q0DRB6_______________NWLGMPFLQLYRALNKQWCRSN-----RFDALNEYTPVHVSFLRTVERQVGPKFLFPIGVNDTVVGIYDDEPTSIISYALASHEYHLQLSDE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain