SustainPineDB

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Assembly info
Unigenes
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ECs
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene55503

Length: 122 nt

UniGene Fasta

>sp_v2.0_unigene55503
TTGTGCGAGTTTTGATGGAAGTTGCATGGGACAAGTCTGTATGTCTACAATTGATTCAGCATTCTATGTAGTTGATGCTCACATGTGGGGATTTCGAGATGCATGTACTGAGCACCATTTGC

Ace file of the UniGene sp_v2.0_unigene55503

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	NIN like protein 7 [Arabidopsis thaliana] sp\|Q84TH9.2\|NLP7_ARATH RecName: Full=Protein NLP7; Short=AtNLP7; AltName: Full=NIN-like protein 7; AltName: Full=Nodule inception protein-like protein 7 gb\|AAB63621.1\| unknown protein [Arabidopsis thaliana] emb\|CA	-	-	3.0e-14	82%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	96%
Blast2go	rwp-rk domain-containing protein	-	-	6.80086e-19	89%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to nitrate	GO:0010167	Biological Process	6.80086e-19	89%
Blast2go	response to water deprivation	GO:0009414	Biological Process	6.80086e-19	89%
Blast2go	stomatal movement	GO:0010118	Biological Process	6.80086e-19	89%
Blast2go	nitrate assimilation	GO:0042128	Biological Process	6.80086e-19	89%
Blast2go	nucleus	GO:0005634	Cellular Component	6.80086e-19	89%

Source	InterPros	Term	Type	e value	Identity
Sma3	Phox/Bem1p	IPR000270	-	0.0	-
Sma3	Plant regulator RWP-RK	IPR003035	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: D5A7X9

Fln msg: Distance to subject end: 721 aas, your sequence is shorter than subject: 32 - 753

Fln protein: MGQVCMSTIDSAFYVVDAHMWGFRDACTEHHL

Protein Length: 33

Fln nts: TTGTGCGAGTTTTGATGGAAGTTGC_-_ATGGGACAAGTCTGTATGTCTACAATTGATTCAGCATTCTATGTAGTTGATGCTCACATGTGGGGATTTCGAGATGCATGTACTGAGCACCATTTGC

Fln Alignment:

AllPineV4_c55474___MGQVCMSTIDSAFYVVDAHMWGFRDACTEHHL
D5A7X9_______________MGQVCMSTIDSAFYVIDAHMWGFRDACTEHHL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain