SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene53967

Length: 304 nt

Origin of reads: Uagpf v2

UniGene Fasta

>sp_v2.0_unigene53967
CGTCGTGACCTTGGCTGTCACTCAACTATCTATTCTTCTGCTGTTAGTGACTGCCTTTGCCTAGTTCAATTTCTGCACCTTCAGACCAGTAGAAAGATGGGACCTTTGCAAGGCCTGCTGCTTCTGTGTTTTTATGTGTTCCCTTGGCCCGGGGATTCACAATTATTCTACCAGACTCCCCCGATGATCTACTCAATACCAACACGGACAAGGCCAACACAGACCCAAAAGAGCAGAAGGCAGTTTATGAGATCATGACAGCCACAGGGAATGAGTGGGCAACCAGCATCCCAGATGTGTGCAA

Ace file of the UniGene sp_v2.0_unigene53967

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	TMM; TMM (TOO MANY MOUTHS); protein binding / receptor	-	-	2.0e-08	49%
FL-Next	sp=Protein TOO MANY MOUTHS; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	49%
Blast2go	protein too many mouths	-	-	3.42134e-11	61%

Source	GOs	Term	Type	e value	Identity
Blast2go	stomatal complex morphogenesis	GO:0010103	Biological Process	3.42134e-11	61%
Blast2go	response to abscisic acid stimulus	GO:0009737	Biological Process	3.42134e-11	61%
Blast2go	asymmetric cell division	GO:0008356	Biological Process	3.42134e-11	61%
Blast2go	protein binding	GO:0005515	Molecular Function	3.42134e-11	61%

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: sp_plants

Fln subject: Q9SSD1

Fln msg: Distance to subject end: 414 aas, Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 70 - 496

Fln protein: KDGTFARPAASVFLCVPLARGFTIILPDSPDDLLNTNTDKANTDPKEQKAVYEIMTATGNEWATSIPDVC

Protein Length: 71

Fln nts: CGTCGTGACCTTGGCTGTCACTCAACTATCTATTCTTCTGCTGTTAGTGACTGCCTTTGCCTAGTTCAATTTCTGCACCTTCAGACCAGTAGAAAGATGGGACCTTTGCAAGGCCTGCTGCTTCTGTGTTTTTATGTGTTCCCTTGGCCCGGGGATTCACAATTATTCTACCAGACTCCCCCGATGATCTACTCAATACCAACACGGACAAGGCCAACACAGACCCAAAAGAGCAGAAGGCAGTTTATGAGATCATGACAGCCACAGGGAATGAGTGGGCAACCAGCATCCCAGATGTGTGCAA

Fln Alignment:

AllPineV4_c53649___PLARGFTIILPDS---------PDDLLNTNTDKANTDPKEQKAVYEIMTATGNEWATSIPDVC
Q9SSD1_______________PLVRSFTVITSDSTAPSALIDGPQTGFTMTNDGARTEPDEQDAVYDIMRATGNDWAAAIPDVC

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain