SustainPineDB

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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene53686

Length: 418 nt

Origin of reads: Uagpf v2

UniGene Fasta

>sp_v2.0_unigene53686
CGTCGTGACCTTGGCTGTCACTCAAATCGGCTTTCAGAAACTCCAGAATCACGATGGAGAAGGTTGTAATCCTTTGCTTGATATGCACACTTGGGATCGCGTATGCGAGCGTTGATGAAATTCTAACTTTGTATCCTGAACCGCCCCTCGTTAATGGACTGTCATGGACATTTTACAAGACGAGCTGCCCTGATTTGGAATCTGTTGTGAGGGAAAGGATCAACTTTCACTTAAAGAAGGACATCACCCAAGCGGCTGGTTTGCTGCGCGTCCATTTCCATGACTGTTTCGTTCAGGGTTGCGACGGATCGGTTCTGTTGGACGGTTCTGCCAGCGGTCCTAGCGAACAAGACGCTCCACCCAACTTACGCTGAGAGCAAAAGCCTTTGAAATAATAAACGACATCAAGAAACATGTG

Ace file of the UniGene sp_v2.0_unigene53686

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Peroxidase n=1 Tax=Picea abies RepID=Q5W5I4_PICAB	-	-	9.94922e-44	77%
FL-Next	tr=Peroxidase; Picea abies (Norway spruce) (Picea excelsa).	-	-	0.0	77%
Blast2go	peroxidase	-	-	0.0	80%

Source	InterPros	Term	Type	Identity
Sma3	Plant peroxidase	IPR000823	-	-
Sma3	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	-
Sma3	Phosphopantetheine attachment site	IPR006162	-	-
Sma3	Peroxidases heam-ligand binding site	IPR019793	-	-
Sma3	Peroxidase, active site	IPR019794	-	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: Q5W5I4

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 231 aas, your sequence is shorter than subject: 107 - 353

Fln protein: MEKVVILCLICTLGIAYASVDEILTLYPEPPLVNGLSWTFYKTSCPDLESVVRERINFHLKKDITQAAGLLRVHFHDCFVQGCDGSVLLDGSASGPSEQDAPPNLR*

Protein Length: 108

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAATCGGCTTTCAGAAACTCCAGAATCACG_-_ATGGAGAAGGTTGTAATCCTTTGCTTGATATGCACACTTGGGATCGCGTATGCGAGCGTTGATGAAATTCTAACTTTGTATCCTGAACCGCCCCTCGTTAATGGACTGTCATGGACATTTTACAAGACGAGCTGCCCTGATTTGGAATCTGTTGTGAGGGAAAGGATCAACTTTCACTTAAAGAAGGACATCACCCAAGCGGCTGGTTTGCTGCGCGTCCATTTCCATGACTGTTTCGTTCAGGGTTGCGACGGATCGGTTCTGTTGGACGGTTCTGCCAGCGGTCCTAGCGAACAAGACGCTCCACCCAACTTACGCTGAGAGCAAAAGCCTTTGAAATAATAAACGACATCAAGAAACATGTG

Fln Alignment:

AllPineV4_c53315___MEKVVILCLICTLGIAYASVDEILTLYPEPPLVNGLSWTFYKTSCPDLESVVRERINFHLKKDITQAAGLLRVHFHDCFVQGCDGSVLLDGSASGPSEQDAPPNL
Q5W5I4_______________MEKLMILCLFCTLWIACASRENVLTLNSDPPLVNGLSWTFYKSSCPKLESIVKQRIDFYLKQDITQAAGLLRLHFHDCFVQGCDGSVLLAGSTSGPSEQGAPPNL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain