SustainPineDB

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Assembly info
Unigenes
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene49919

Length: 325 nt

UniGene Fasta

>sp_v2.0_unigene49919
CGTCGTGACCTTGGTTGTGTGTCGTTTTTGCAATTCGAAATGCCTCAGAAAGATAGAGTCGCCTACTTCTACGACGAAATGGGAGAGAAACCCAGGCTACTGATACTTTATGCTTCCCAAACTGGCAATGCACAAGATGCTGCAGAACGCATTGGACGTGAAGCAGAGCGGAGGTGTTGTCAAGCTCTGGTAGTTTCAATGGAAGATTTTGATGTGCGATGTCTACCAAATGAAGCTTTGGTGATTTTTGTGGTTTCAACCACTGGCCAAGGGGACTCACCAGATTCAATGAAGGCATTCTGGAAGTTTTTACTCATGAGGAGCC

Ace file of the UniGene sp_v2.0_unigene49919

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	flavodoxin-like protein [Arabidopsis thaliana] gb\|AAR23709.1\| At3g02280 [Arabidopsis thaliana] dbj\|BAF01311.1\| hypothetical protein [Arabidopsis thaliana] gb\|AEE73787.1\| flavodoxin-like protein [Arabidopsis thaliana]	-	-	4.0e-16	58%
FL-Next	tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).	-	-	0.0	72%
Blast2go	nadph-cytochrome p450 oxydoreductase	-	-	8.65564e-23	79%

Source	InterPros	Term	Type	Identity
Sma3	Flavodoxin	IPR001094	-	-
Sma3	Oxidoreductase FAD/NAD(P)-binding	IPR001433	-	-
Sma3	Flavoprotein pyridine nucleotide cytochrome reductase	IPR001709	-	-
Sma3	FAD-binding, type 1	IPR003097	-	-
Sma3	Flavodoxin/nitric oxide synthase	IPR008254	-	-
Sma3	Ferredoxin reductase-type FAD-binding domain	IPR017927	-	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: tr_plants

Fln subject: D7MY40

Fln msg: Distance to subject end: 61 aas, your sequence is shorter than subject: 95 - 144

Fln protein: MPQKDRVAYFYDEMGEKPRLLILYASQTGNAQDAAERIGREAERRCCQALVVSMEDFDVRCLPNEALVIFVVSTTGQGDSPDSMKAFWKFLLMRS

Protein Length: 96

Fln nts: CGTCGTGACCTTGGTTGTGTGTCGTTTTTGCAATTCGAA_-_ATGCCTCAGAAAGATAGAGTCGCCTACTTCTACGACGAAATGGGAGAGAAACCCAGGCTACTGATACTTTATGCTTCCCAAACTGGCAATGCACAAGATGCTGCAGAACGCATTGGACGTGAAGCAGAGCGGAGGTGTTGTCAAGCTCTGGTAGTTTCAATGGAAGATTTTGATGTGCGATGTCTACCAAATGAAGCTTTGGTGATTTTTGTGGTTTCAACCACTGGCCAAGGGGACTCACCAGATTCAATGAAGGCATTCTGGAAGTTTTTACTCATGAGGAGCC

Fln Alignment:

AllPineV4_c48803___MGEKPR-LLILYASQTGNAQDXXXXXXXXXXXXCCQALVVSMEDFDVRCLPNEALVIFVVSTTGQGDSPDSMKAFWKFLLMRS
D7MY40_______________MGEKPRKLLVMYASQTGNALDAAERIGREAERRGFPASIVSTDEFDASSLPHEEAVVFVVSTTGQGDSPDSFKAFWRFLLQRN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain