SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene49538

Length: 586 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene49538

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	pyridoxal kinase [Glycine max]	-	-	1.0e-38	49%
FL-Next	sp=Pyridoxal kinase; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	47%
Blast2go	pyridoxal kinase	-	-	0.0	57%

Source	ECs	Term	Type	e value	Identity
Blast2go	Pyridoxal kinase.	EC:2.7.1.35	-	0.0	57%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Vitamin B6 metabolism	00750		0.0	57%
Blast2go	Metabolic pathways	01100		0.0	57%

Source	GOs	Term	Type	Identity
Blast2go	trichoblast differentiation	GO:0010054	Biological Process	57%
Blast2go	hyperosmotic salinity response	GO:0042538	Biological Process	57%
Blast2go	pyridoxal 5'-phosphate salvage	GO:0009443	Biological Process	57%
Blast2go	pyridoxal kinase activity	GO:0008478	Molecular Function	57%

Source	InterPros	Term	Type	Identity
Sma3	Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase	IPR004625	-	-
Sma3	Carbohydrate/purine kinase	IPR011611	-	-
Sma3	Phosphomethylpyrimidine kinase type-1	IPR013749	-	-

Full-Lengther Next Prediction

SNPs (tot: 10)

Position	A %	C %	G %	T %	Probability
213		66		33	0.997476
214	66	33			0.997476
216			66	33	0.997476
224			33	66	0.997471
225	66		33		0.997467
226	66	33			0.997464
227	66			33	0.997464
230		33		66	0.997476
232	66	33			0.997459
233	66			33	0.997471

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain