SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene49080

Length: 257 nt

Origin of reads: Biogeco1 v2

UniGene Fasta

>sp_v2.0_unigene49080
ATGGGAGGGAAGGGAGCAGGAGAAGTTCCAGTGTTAATTGGTTACTTGCAGAGGGTTTTGGGGGATTTTGCAGATTTGATTTAATTATCAATGGGGAAGCTACTTGAGAAATCAACGCCTTATGTAGCGATGATATCCCTGCAGTTTGGATACGCAGGCATGAATGTCATCGGTAAAGTGTCTCTCAACAGAGGGATGAGTCACTTTGTGCTTGTTGTGTACAGGCAGATCGTGGCTACAGTTGTGCTTGCTCCTTT

Ace file of the UniGene sp_v2.0_unigene49080

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	81%
Blast2go	protein	-	-	6.7409e-21	82%

Source	InterPros	Term	Type	e value	Identity
Sma3	Drug/metabolite transporter	IPR000620	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NWT4

Fln msg: Distance to subject end: 336 aas, your sequence is shorter than subject: 55 - 392

Fln protein: MGKLLEKSTPYVAMISLQFGYAGMNVIGKVSLNRGMSHFVLVVYRQIVATVVLAP

Protein Length: 56

Fln nts: ATGGGAGGGAAGGGAGCAGGAGAAGTTCCAGTGTTAATTGGTTACTTGCAGAGGGTTTTGGGGGATTTTGCAGATTTGATTTAATTATCA_-_ATGGGGAAGCTACTTGAGAAATCAACGCCTTATGTAGCGATGATATCCCTGCAGTTTGGATACGCAGGCATGAATGTCATCGGTAAAGTGTCTCTCAACAGAGGGATGAGTCACTTTGTGCTTGTTGTGTACAGGCAGATCGTGGCTACAGTTGTGCTTGCTCCTTT

Fln Alignment:

AllPineV4_c47804___MGKLLEKSTPYVAMISLQFGYAGMNVIGKVSLNRGMSHFVLVVYRQIVATVVLAP
A9NWT4_______________MEKLIERSKPYVAMISLQFGYAGMNIITKVSLNRGMNHFVLVVYRHAAATVVLAP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain