SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene48577

Length: 311 nt

UniGene Fasta

>sp_v2.0_unigene48577
AGCCTGCTTGGGACGGCAATAATGCTGCAACTTTTGAGATGAGCTTCACAGGACATATGCAGGGGGAGTTCCAAATCTCAAACGGTTATGAACCCGAGAGAGCTGCCCAAGTCTTGAAGGAACATCGCAGCACTTTCATTAGGGAGGATGATTTCGTTTTCCTGTCCAAGCAAGGGATAAGTGCTGTCAGAATCCCAGTTGGATGGTGGATAGCAAGTGATCCAAAACCTCCTGCTCCTTTTGTCGGAGGATCTCTGGAATGTCTAGATAAAGCTTTCTCATGGGCACAGAATCATGGTATTAAGGTTATT

Ace file of the UniGene sp_v2.0_unigene48577

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putataive glucan 1,3-beta-glucosidase precursor [Oryza sativa Japonica Group]	-	-	2.0e-28	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	61%
Blast2go	glucan -beta-glucosidase	-	-	2.37463e-39	77%

Source	InterPros	Term	Type	Identity
Sma3	Glycoside hydrolase, family 5	IPR001547	-	-
Sma3	Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ	IPR013114	-	-
Sma3	Glycoside hydrolase, subgroup, catalytic domain	IPR013781	-	-
Sma3	Glycoside hydrolase, family 5, conserved site	IPR018087	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LKR6

Fln msg: Distance to subject end: 229 aas, your sequence is shorter than subject: 103 - 511

Fln protein: PAWDGNNAATFEMSFTGHMQGEFQISNGYEPERAAQVLKEHRSTFIREDDFVFLSKQGISAVRIPVGWWIASDPKPPAPFVGGSLECLDKAFSWAQNHGIKVI

Protein Length: 104

Fln nts: AGCCTGCTTGGGACGGCAATAATGCTGCAACTTTTGAGATGAGCTTCACAGGACATATGCAGGGGGAGTTCCAAATCTCAAACGGTTATGAACCCGAGAGAGCTGCCCAAGTCTTGAAGGAACATCGCAGCACTTTCATTAGGGAGGATGATTTCGTTTTCCTGTCCAAGCAAGGGATAAGTGCTGTCAGAATCCCAGTTGGATGGTGGATAGCAAGTGATCCAAAACCTCCTGCTCCTTTTGTCGGAGGATCTCTGGAATGTCTAGATAAAGCTTTCTCATGGGCACAGAATCATGGTATTAAGGTTATT

Fln Alignment:

AllPineV4_c47220___PAWDGNNAATFEMSF-TGH--MQGEFQISNGYEPERAAQVLKEHRSTFIREDDFVFLSKQGISAVRIPVGWWIASDPKPPAPFVGGSLECLDKAFSWAQNHGIKVI
B8LKR6_______________PGWNDGNAATFEMNIVTGDYGIGGEYQLTNGLGPDKAPQVMNDHWNSFITESDFEFMSSKGITAVRIPVGWWIASDPNPPAPFVGGSLKALDNAFTWAKNHNIGVI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain