SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene46725

Length: 624 nt

Origin of reads: Biogeco1 v2 Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene46725

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF647 domain containing protein	-	-	1.0e-14	41%
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	0.0	72%
Blast2go	upf0420 protein c16orf58 homolog	-	-	0.0	89%

Source	GOs	Term	Type	Identity
Blast2go	response to UV-B	GO:0010224	Biological Process	89%
Blast2go	auxin polar transport	GO:0009926	Biological Process	89%
Blast2go	chloroplast envelope	GO:0009941	Cellular Component	89%
Blast2go	mitochondrion	GO:0005739	Cellular Component	89%

Source	InterPros	Term	Type	e value	Identity
Sma3	Protein of unknown function DUF647	IPR006968	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 17)

Position	A %	C %	G %	T %	Probability
252	33		66		0.997457
256			66	33	0.997457
324	80		20		0.995493
325	80			20	0.995493
326	80	20			0.995493
328	75			25	0.996474
329	75		25		0.996474
331	75	25			0.996474
332	75	25			0.996474
336			25	75	0.996473
337	75	25			0.996474
338	75			25	0.996474
341	75	25			0.996473
343		25	75		0.996473
344			75	25	0.996473
345	75	25			0.996473
519		33		66	0.997476

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain