SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene43804

Length: 235 nt

UniGene Fasta

>sp_v2.0_unigene43804
TATCTCCAGATAGGGAAGAGGCTAAGGAAAGGAAGTGTGTTTTGAAAGTTTTTGCAGATTTGATCTGATTATCAATGGGGACGTTAATTCAGAAATCAACCCCCTATATAGCGATGATATCCCTGCAGTTTGGATACGCAGGCATGAATATTATCAGTAAAGTGTCTCTTAACAGAGGGATGAGTCACTTTGTGCTTGTTGTGTACAGGCAGGCCGTTGCTACAGTTGTGCTCGC

Ace file of the UniGene sp_v2.0_unigene43804

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	81%
Blast2go	protein	-	-	1.16158e-20	86%

Source	InterPros	Term	Type	e value	Identity
Sma3	Drug/metabolite transporter	IPR000620	-	0.0	-
Sma3	Ribosomal protein L29, conserved site	IPR018254	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NWT4

Fln msg: Distance to subject end: 338 aas, your sequence is shorter than subject: 53 - 392

Fln protein: MGTLIQKSTPYIAMISLQFGYAGMNIISKVSLNRGMSHFVLVVYRQAVATVVL

Protein Length: 54

Fln nts: TATCTCCAGATAGGGAAGAGGCTAAGGAAAGGAAGTGTGTTTTGAAAGTTTTTGCAGATTTGATCTGATTATCA_-_ATGGGGACGTTAATTCAGAAATCAACCCCCTATATAGCGATGATATCCCTGCAGTTTGGATACGCAGGCATGAATATTATCAGTAAAGTGTCTCTTAACAGAGGGATGAGTCACTTTGTGCTTGTTGTGTACAGGCAGGCCGTTGCTACAGTTGTGCTCGC

Fln Alignment:

AllPineV4_c41625___MGTLIQKSTPYIAMISLQFGYAGMNIISKVSLNRGMSHFVLVVYRQAVATVVL
A9NWT4_______________MEKLIERSKPYVAMISLQFGYAGMNIITKVSLNRGMNHFVLVVYRHAAATVVL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain