SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene42516

Length: 607 nt

Origin of reads: Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene42516

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	armadillo repeat only 1 protein [Arabidopsis thaliana] emb\|CAB45455.1\| putative protein [Arabidopsis thaliana] emb\|CAB80211.1\| putative protein [Arabidopsis thaliana] gb\|AEE86439.1\| armadillo repeat only 1 protein [Arabidopsis thaliana]	-	-	57%
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	60%
Blast2go	protein	-	-	77%

Source	GOs	Term	Type	Identity
Blast2go	pollen tube growth	GO:0009860	Biological Process	77%
Blast2go	actin cytoskeleton organization	GO:0030036	Biological Process	77%
Blast2go	cytoplasm	GO:0005737	Cellular Component	77%
Blast2go	plasma membrane	GO:0005886	Cellular Component	77%
Blast2go	nucleus	GO:0005634	Cellular Component	77%
Blast2go	pollen tube tip	GO:0090404	Biological Process	77%

Source	InterPros	Term	Type	Identity
Sma3	Armadillo	IPR000225	-	-
Sma3	Regulator of chromosome condensation, RCC1	IPR000408	-	-
Sma3	Armadillo-like helical	IPR011989	-	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	G %	Probability
364		50	50	1.0
427	80		20	0.9955
459	66		33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain