SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene40473

Length: 761 nt

Origin of reads: Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene40473

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	DNA mismatch repair protein MSH6-2, putative n=1 Tax=Ricinus communis RepID=B9RKT8_RICCO	-	-	56%
FL-Next	sp=DNA mismatch repair protein Msh6-2; Arabidopsis thaliana (Mouse-ear cress).	-	-	54%
Blast2go	dna mismatch repair protein msh6-2	-	-	70%

Source	InterPros	Term	Type	Identity
Sma3	DNA mismatch repair protein MutS, C-terminal	IPR000432	-	-
Sma3	DNA mismatch repair protein MutS-like, N-terminal	IPR007695	-	-
Sma3	DNA mismatch repair protein MutS, core	IPR007696	-	-
Sma3	DNA mismatch repair protein MutS, connector	IPR007860	-	-
Sma3	DNA mismatch repair protein MutS-homologue MSH6	IPR015536	-	-
Sma3	DNA mismatch repair protein MutS, N-terminal	IPR016151	-	-

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
343		25		75	0.996473
434		33		66	0.997453
457	25			75	0.996473
459	75		25		0.996473
461			25	75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain