SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene39547

Length: 542 nt

Origin of reads: Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene39547 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	putative beta-D-xylosidase 7 [Arabidopsis thaliana] sp\|Q9SGZ5.2\|BXL7_ARATH RecName: Full=Probable beta-D-xylosidase 7; Short=AtBXL7; Flags: Precursor gb\|AAL57631.1\| At1g78060/F28K19_32 [Arabidopsis thaliana] gb\|AEE36063.1\| putative beta-D-xylosidase 7 [Ar	-	-	61%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	54%
Blast2go	xylan 1 4-beta-xylosidase	-	-	77%

Source	GOs	Term	Type	Identity
Blast2go	plant-type cell wall	GO:0009505	Cellular Component	77%
Blast2go	apoplast	GO:0048046	Cellular Component	77%
Blast2go	chloroplast	GO:0009507	Cellular Component	77%

Source	InterPros	Term	Type	Identity
Sma3		IPR000173	-	-
Sma3	Parathyroid hormone/parathyroid hormone-related protein	IPR001415	-	-
Sma3	Glycoside hydrolase, family 3, N-terminal	IPR001764	-	-
Sma3	DNA methylase, N-6 adenine-specific, conserved site	IPR002052	-	-
Sma3	NB-ARC	IPR002182	-	-
Sma3	Glycoside hydrolase family 3 C-terminal domain	IPR002772	-	-

Full-Lengther Next Prediction

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain