SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene38068

Length: 615 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene38068

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	pfam00069, Pkinase, Protein kinase domain	-	-	1.0e-14	31%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	61%
Blast2go	mitogen-activated protein kinase kinase	-	-	3.05138e-22	67%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases.	EC:2.7.11.-	-	3.05138e-22	67%

Source	GOs	Term	Type	e value	Identity
Blast2go	positive regulation of protein phosphorylation	GO:0001934	Biological Process	3.05138e-22	67%
Blast2go	response to wounding	GO:0009611	Biological Process	3.05138e-22	67%
Blast2go	ethylene biosynthetic process	GO:0009693	Biological Process	3.05138e-22	67%
Blast2go	ethylene mediated signaling pathway	GO:0009873	Biological Process	3.05138e-22	67%
Blast2go	camalexin biosynthetic process	GO:0010120	Biological Process	3.05138e-22	67%
Blast2go	response to salt stress	GO:0009651	Biological Process	3.05138e-22	67%
Blast2go	protein autophosphorylation	GO:0046777	Biological Process	3.05138e-22	67%
Blast2go	positive regulation of transcription, DNA-dependent	GO:0045893	Biological Process	3.05138e-22	67%
Blast2go	MAP kinase kinase activity	GO:0004708	Molecular Function	3.05138e-22	67%
Blast2go	protein binding	GO:0005515	Molecular Function	3.05138e-22	67%
Blast2go	protein kinase activator activity	GO:0030295	Molecular Function	3.05138e-22	67%
Blast2go	protein serine/threonine kinase activity	GO:0004674	Molecular Function	3.05138e-22	67%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-

Full-Lengther Next Prediction

SNPs (tot: 17)

Position	A %	C %	G %	T %	Probability
147			66	33	0.997464
152	33	66			0.997464
154		33	66		0.997464
155			66	33	0.997464
193	66		33		0.997454
215	66	33			0.997464
263		20	80		0.995499
265	80			20	0.995505
268		80		20	0.995505
269		80	20		0.995505
270	20			80	0.995505
272		80		20	0.995505
282		25	75		0.996473
285			75	25	0.996473
286		25	75		0.996473
287	25	75			0.996473
305	50		50		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain